Detailed information
Bioinformatically predicted
Overview
| Name | abrB | Type | Regulator |
| Locus tag | BKP58_RS12110 | Genome accession | NZ_CP017763 |
| Coordinates | 2240159..2240449 (+) | Length | 96 a.a. |
| NCBI ID | WP_003226760.1 | Uniprot ID | A0A7G9PCZ4 |
| Organism | Bacillus subtilis strain 29R7-12 | ||
| Function | repression of comK; repression of rok (predicted from homology) Competence regulation |
||
Genomic Context
Location: 2235159..2245449
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| BKP58_RS12095 (BKP58_12080) | yabE | 2235354..2236667 (-) | 1314 | WP_003226754.1 | ubiquitin-like domain-containing protein | - |
| BKP58_RS12100 (BKP58_12085) | dayD | 2236823..2237590 (-) | 768 | WP_014478595.1 | TatD family hydrolase | - |
| BKP58_RS12105 (BKP58_12090) | metG | 2237670..2239664 (-) | 1995 | WP_014478594.1 | methionine--tRNA ligase | - |
| BKP58_RS12110 (BKP58_12095) | abrB | 2240159..2240449 (+) | 291 | WP_003226760.1 | transition state genes transcriptional regulator AbrB | Regulator |
| BKP58_RS12115 (BKP58_12100) | rsmI | 2240498..2241376 (-) | 879 | WP_003243457.1 | 16S rRNA (cytidine(1402)-2'-O)-methyltransferase | - |
| BKP58_RS12120 (BKP58_12105) | yazA | 2241351..2241650 (-) | 300 | WP_003242983.1 | GIY-YIG nuclease family protein | - |
| BKP58_RS12125 (BKP58_12110) | trmNF | 2241637..2242380 (-) | 744 | WP_003244526.1 | tRNA1(Val) (adenine(37)-N6)-methyltransferase | - |
| BKP58_RS12130 (BKP58_12115) | yabA | 2242439..2242798 (-) | 360 | WP_003218308.1 | replication initiation-control protein YabA | - |
| BKP58_RS12135 (BKP58_12120) | ricT | 2242813..2243640 (-) | 828 | WP_003226767.1 | competence/sporulation regulator complex protein RicT | - |
| BKP58_RS12140 (BKP58_12125) | holB | 2243643..2244632 (-) | 990 | WP_003226770.1 | DNA polymerase III subunit delta' | - |
| BKP58_RS12145 (BKP58_12130) | yaaR | 2244644..2245084 (-) | 441 | WP_009966249.1 | YaaR family protein | - |
| BKP58_RS12150 (BKP58_12135) | darA | 2245097..2245426 (-) | 330 | WP_003242755.1 | cyclic di-AMP receptor DarA | - |
Sequence
Protein
Download Length: 96 a.a. Molecular weight: 10772.62 Da Isoelectric Point: 6.3482
>NTDB_id=202670 BKP58_RS12110 WP_003226760.1 2240159..2240449(+) (abrB) [Bacillus subtilis strain 29R7-12]
MFMKSTGIVRKVDELGRVVIPIELRRTLGIAEKDALEIYVDDEKIILKKYKPNMTCQVTGEVSDDNLKLAGGKLVLSKEG
AEQIISEIQNQLQNLK
MFMKSTGIVRKVDELGRVVIPIELRRTLGIAEKDALEIYVDDEKIILKKYKPNMTCQVTGEVSDDNLKLAGGKLVLSKEG
AEQIISEIQNQLQNLK
Nucleotide
Download Length: 291 bp
>NTDB_id=202670 BKP58_RS12110 WP_003226760.1 2240159..2240449(+) (abrB) [Bacillus subtilis strain 29R7-12]
ATGTTTATGAAATCTACTGGTATTGTACGTAAAGTTGATGAATTAGGACGTGTAGTTATTCCTATCGAACTGCGTCGTAC
TCTTGGAATCGCAGAAAAAGATGCTCTTGAAATCTATGTTGATGATGAAAAAATCATCCTTAAAAAATATAAACCAAACA
TGACTTGCCAAGTAACTGGTGAAGTTTCTGATGATAACCTTAAACTTGCAGGCGGTAAATTGGTTCTTAGTAAAGAAGGC
GCTGAGCAAATCATCAGCGAAATCCAAAACCAGCTTCAAAACCTTAAATAA
ATGTTTATGAAATCTACTGGTATTGTACGTAAAGTTGATGAATTAGGACGTGTAGTTATTCCTATCGAACTGCGTCGTAC
TCTTGGAATCGCAGAAAAAGATGCTCTTGAAATCTATGTTGATGATGAAAAAATCATCCTTAAAAAATATAAACCAAACA
TGACTTGCCAAGTAACTGGTGAAGTTTCTGATGATAACCTTAAACTTGCAGGCGGTAAATTGGTTCTTAGTAAAGAAGGC
GCTGAGCAAATCATCAGCGAAATCCAAAACCAGCTTCAAAACCTTAAATAA
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| abrB | Bacillus subtilis subsp. subtilis str. 168 |
100 |
100 |
1 |