Detailed information    

insolico Bioinformatically predicted

Overview

Name   recX   Type   Regulator
Locus tag   BKP58_RS07660 Genome accession   NZ_CP017763
Coordinates   1377281..1378075 (-) Length   264 a.a.
NCBI ID   WP_014479217.1    Uniprot ID   -
Organism   Bacillus subtilis strain 29R7-12     
Function   inhibit excessive RecA-mediated recombination (predicted from homology)   
Competence regulation

Genomic Context

Location: 1372281..1383075
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  BKP58_RS07625 (BKP58_07645) ephM 1373124..1373984 (-) 861 WP_014479220.1 epoxide hydrolase EphM -
  BKP58_RS07630 (BKP58_07650) spdL 1373971..1374303 (-) 333 WP_014479219.1 SdpC immunity protein SpdL -
  BKP58_RS07635 (BKP58_07655) yfhK 1374388..1374906 (-) 519 WP_014479218.1 SH3 domain-containing protein -
  BKP58_RS07640 (BKP58_07660) yfhJ 1375051..1375320 (-) 270 WP_003243789.1 YfhJ family protein -
  BKP58_RS07645 (BKP58_07665) sspK 1375445..1375597 (+) 153 WP_003223241.1 small, acid-soluble spore protein K -
  BKP58_RS07650 (BKP58_07670) yfhI 1375629..1376822 (-) 1194 WP_003243500.1 MFS transporter -
  BKP58_RS07655 (BKP58_07680) yfhH 1376965..1377279 (-) 315 WP_003244592.1 YfhH family protein -
  BKP58_RS07660 (BKP58_07685) recX 1377281..1378075 (-) 795 WP_014479217.1 recombination regulator RecX Regulator
  BKP58_RS07665 (BKP58_07690) yfhF 1378164..1379075 (+) 912 WP_014479216.1 TIGR01777 family oxidoreductase -
  BKP58_RS07670 (BKP58_07695) yfhE 1379130..1379240 (+) 111 WP_003223230.1 YfhE family protein -
  BKP58_RS07675 (BKP58_07700) yfhD 1379306..1379497 (+) 192 WP_014479215.1 YfhD family protein -
  BKP58_RS07680 (BKP58_07705) yfhC 1379536..1380120 (-) 585 WP_033881364.1 nitroreductase family protein -
  BKP58_RS07685 (BKP58_07710) yfhB 1380208..1381089 (-) 882 WP_014479213.1 PhzF family phenazine biosynthesis isomerase -
  BKP58_RS07690 (BKP58_07715) sxzA 1381204..1382235 (-) 1032 WP_003233568.1 FecCD family ABC transporter permease -

Sequence

Protein


Download         Length: 264 a.a.        Molecular weight: 31029.21 Da        Isoelectric Point: 6.6686

>NTDB_id=202660 BKP58_RS07660 WP_014479217.1 1377281..1378075(-) (recX) [Bacillus subtilis strain 29R7-12]
MPFITKISTQKKNTERFNIFLDDKYAFSVDADVLVKFELKKGKELDDLDIIEIQYGDEVKKGFNRALDFLSYRMRSTKEV
EDHLKKKETSPPVIAEVIHRLNDYKYLNDQEFAAAYVSTHKKTNGKGPDVLFRELRAKGIDDDTIKEALSSFSFEDQTRE
AVKHVEKLLKKDKKLSTKEFKQRAQLQLQRKGFSFDVISAAMDQIEYENDEDTEKEALRLHAEKAFRKYRYDGSYESAIK
VKQFLFRKGFSLDLIEQLLQEEEY

Nucleotide


Download         Length: 795 bp        

>NTDB_id=202660 BKP58_RS07660 WP_014479217.1 1377281..1378075(-) (recX) [Bacillus subtilis strain 29R7-12]
ATGCCGTTTATTACAAAAATATCAACGCAAAAAAAGAATACGGAACGCTTCAATATTTTTCTGGATGATAAATACGCCTT
CAGCGTGGACGCGGATGTGCTCGTGAAATTTGAGCTCAAGAAGGGAAAAGAACTCGATGATCTTGACATCATTGAGATTC
AATACGGCGATGAAGTGAAGAAAGGCTTCAACCGTGCGCTTGACTTTTTATCCTATCGAATGCGGTCGACGAAAGAGGTC
GAGGACCACTTAAAGAAAAAAGAAACCTCGCCCCCCGTCATTGCGGAAGTCATCCATAGGCTTAACGATTACAAGTACTT
AAACGACCAGGAATTTGCCGCAGCCTATGTCAGCACTCACAAAAAAACAAACGGAAAAGGCCCTGATGTTTTGTTCAGAG
AGCTAAGAGCGAAGGGAATTGATGACGATACAATTAAGGAGGCGCTAAGTTCCTTTTCCTTTGAAGATCAGACAAGAGAA
GCGGTCAAGCATGTTGAAAAGCTTCTCAAAAAAGATAAAAAGCTTTCGACGAAAGAATTCAAACAGCGCGCCCAGCTGCA
GCTTCAGCGCAAGGGCTTCTCATTTGATGTTATCAGCGCGGCGATGGATCAGATTGAATATGAAAATGATGAAGACACGG
AGAAAGAAGCGCTGCGCCTTCACGCGGAAAAAGCGTTTAGAAAATACCGCTATGACGGCTCATATGAAAGCGCCATTAAG
GTCAAACAATTTTTATTCCGCAAAGGATTCTCACTCGATTTAATCGAGCAATTACTGCAGGAAGAGGAGTACTGA

Domains

Predicted by InterproScan.

RecX family (RecX_HTH2)

(84-204)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  recX Bacillus subtilis subsp. subtilis str. 168

99.242

100

0.992

Multiple sequence alignment