Detailed information    

insolico Bioinformatically predicted

Overview

Name   ceuB   Type   Machinery gene
Locus tag   BKP57_RS14695 Genome accession   NZ_CP017762
Coordinates   3218891..3219844 (+) Length   317 a.a.
NCBI ID   WP_050351359.1    Uniprot ID   A0A0L0QJW3
Organism   Virgibacillus sp. 6R     
Function   DNA uptake (predicted from homology)   
DNA binding and uptake

Genomic Context

Location: 3213891..3224844
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  BKP57_RS14675 (BKP57_14400) fni 3214113..3215168 (+) 1056 WP_072741834.1 type 2 isopentenyl-diphosphate Delta-isomerase -
  BKP57_RS14680 (BKP57_14405) - 3215533..3215982 (+) 450 WP_072741835.1 DUF2188 domain-containing protein -
  BKP57_RS14685 (BKP57_14410) - 3216403..3217224 (+) 822 WP_232231430.1 MBL fold metallo-hydrolase -
  BKP57_RS14690 (BKP57_14415) - 3217725..3218450 (+) 726 WP_072742445.1 DsbA family oxidoreductase -
  BKP57_RS14695 (BKP57_14420) ceuB 3218891..3219844 (+) 954 WP_050351359.1 ABC transporter permease Machinery gene
  BKP57_RS14700 (BKP57_14425) - 3219834..3220784 (+) 951 WP_072741836.1 iron chelate uptake ABC transporter family permease subunit -
  BKP57_RS14705 (BKP57_14430) - 3220778..3221533 (+) 756 WP_050351357.1 ABC transporter ATP-binding protein -
  BKP57_RS14710 (BKP57_14435) - 3221840..3222808 (+) 969 WP_128743379.1 siderophore ABC transporter substrate-binding protein -
  BKP57_RS14715 (BKP57_14440) - 3223508..3224233 (+) 726 WP_072741837.1 SurA N-terminal domain-containing protein -

Sequence

Protein


Download         Length: 317 a.a.        Molecular weight: 35081.41 Da        Isoelectric Point: 9.9246

>NTDB_id=202628 BKP57_RS14695 WP_050351359.1 3218891..3219844(+) (ceuB) [Virgibacillus sp. 6R]
MKIRYLVVMLIILSFVSIFVGVSNISPLDIFNLSEEQAKVLLISRVPRLFSILIAGMSMSICGLIMQQLSRNKFVSPTTA
GTLDSARLGILVSMVLFTSANPFEKMLVSFAFALLGTFAFMKILEKIKFKDAIFIPLIGLMFGNIVSSMSTFIAYRYDLI
QNISSWMQGDFSMIMTGNYELMFVSIPILIVAFFYANKFTIAGMGEDFSKNLGLNYRQVVNLGLVIVALVTASVVLAVGV
IPFLGLIIPNIVTIYQGDHLKKSLLHTALLGAIFVLVCDIIGRVIIYPYEIPISLTVGVIGSGLFIYLLFRRKKYGL

Nucleotide


Download         Length: 954 bp        

>NTDB_id=202628 BKP57_RS14695 WP_050351359.1 3218891..3219844(+) (ceuB) [Virgibacillus sp. 6R]
ATGAAAATACGTTACTTAGTGGTCATGTTGATTATACTTTCCTTTGTATCTATCTTTGTTGGTGTATCGAATATTTCTCC
GTTAGATATATTTAATCTATCGGAGGAGCAGGCAAAAGTATTATTGATTTCAAGAGTCCCTAGACTTTTCAGTATTTTAA
TAGCTGGGATGAGCATGAGTATTTGTGGGCTAATTATGCAGCAGTTAAGCAGAAATAAATTTGTTTCACCCACAACAGCA
GGAACATTGGATTCAGCAAGGTTAGGAATATTAGTATCAATGGTGCTATTTACTTCCGCTAATCCATTTGAAAAGATGCT
TGTTTCATTTGCCTTTGCATTATTAGGTACATTTGCGTTTATGAAGATACTGGAAAAGATAAAATTTAAAGATGCGATAT
TTATCCCTTTAATTGGATTAATGTTTGGAAACATTGTTAGCTCTATGTCTACTTTTATAGCATATCGCTACGATTTAATC
CAAAACATCTCGTCATGGATGCAAGGAGATTTCTCCATGATCATGACAGGGAATTATGAGCTCATGTTTGTCAGCATTCC
AATTTTAATCGTTGCCTTTTTTTATGCGAATAAATTTACTATTGCTGGTATGGGTGAGGACTTTTCCAAGAACTTGGGAT
TAAATTATCGGCAGGTCGTCAATTTGGGACTTGTGATTGTAGCACTTGTAACCGCCTCAGTTGTCTTGGCAGTAGGAGTT
ATCCCATTTTTAGGTCTTATCATTCCTAATATTGTAACCATTTATCAAGGAGATCATTTGAAAAAAAGCTTGTTACATAC
AGCATTGTTAGGAGCAATATTTGTTCTCGTATGTGATATTATTGGCAGGGTTATTATTTATCCATATGAAATTCCGATTA
GCTTGACGGTTGGGGTCATCGGTAGTGGATTATTTATTTATCTGCTATTTAGGAGAAAAAAATATGGGCTATAA

Domains

Predicted by InterproScan.

FecCD transport family (FecCD)

(10-311)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB A0A0L0QJW3

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  ceuB Campylobacter jejuni subsp. jejuni 81-176

52.848

99.685

0.527

Multiple sequence alignment