Detailed information    

insolico Bioinformatically predicted

Overview


Name   braR   Type   Regulator
Locus tag   CGP86_RS03305 Genome accession   NZ_CP022720
Coordinates   665478..666152 (+) Length   224 a.a.
NCBI ID   WP_001166500.1    Uniprot ID   Q99VW2
Organism   Staphylococcus aureus strain 135     
Function   promote expression of competence genes (predicted from homology)   
Competence regulation

Genomic Context


Location: 660478..671152
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  CGP86_RS03275 (CGP86_00611) - 660693..661760 (+) 1068 WP_000980137.1 membrane protein -
  CGP86_RS03280 (CGP86_00612) - 661911..662954 (+) 1044 WP_001030770.1 alpha/beta hydrolase -
  CGP86_RS03290 (CGP86_00613) - 663283..663711 (+) 429 WP_000198504.1 hypothetical protein -
  CGP86_RS03295 (CGP86_00614) - 663920..664426 (-) 507 WP_000940129.1 GNAT family N-acetyltransferase -
  CGP86_RS03300 (CGP86_00615) graX 664539..665462 (+) 924 WP_000802955.1 auxiliary protein GraX/ApsX -
  CGP86_RS03305 (CGP86_00616) braR 665478..666152 (+) 675 WP_001166500.1 response regulator transcription factor GraR/ApsR Regulator
  CGP86_RS03310 (CGP86_00617) graS 666145..667185 (+) 1041 WP_001061262.1 histidine kinase GraS/ApsS -
  CGP86_RS03315 (CGP86_00618) vraF 667329..668090 (+) 762 WP_000985996.1 ABC transporter ATP-binding protein VraF -
  CGP86_RS03320 (CGP86_00619) vraG 668080..669969 (+) 1890 WP_000143623.1 ABC transporter permease VraG -

Sequence


Protein


Download         Length: 224 a.a.        Molecular weight: 26065.87 Da        Isoelectric Point: 4.3563

>NTDB_id=202606 CGP86_RS03305 WP_001166500.1 665478..666152(+) (braR) [Staphylococcus aureus strain 135]
MQILLVEDDNTLFQELKKELEQWDFNVAGIEDFGKVMDTFESFNPEIVILDVQLPKYDGFYWCRKMREVSNVPILFLSSR
DNPMDQVMSMELGADDYMQKPFYTNVLIAKLQAIYRRVYEFTAEEKRTLTWQDAVVDLSKDSIQKGDDTIFLSKTEMIIL
EILITKKNQIVSRDTIITALWDDEAFVSDNTLTVNVNRLRKKLSEISMDSAIETKVGKGYMAHE

Nucleotide


Download         Length: 675 bp        

>NTDB_id=202606 CGP86_RS03305 WP_001166500.1 665478..666152(+) (braR) [Staphylococcus aureus strain 135]
ATGCAAATACTACTAGTAGAAGATGACAATACTTTGTTTCAAGAATTGAAAAAAGAATTAGAACAATGGGATTTTAATGT
TGCTGGTATTGAAGATTTCGGCAAAGTAATGGATACATTTGAAAGTTTTAATCCTGAAATTGTTATATTGGATGTTCAAT
TACCTAAATATGATGGGTTTTATTGGTGCAGAAAAATGAGAGAAGTTTCCAACGTACCAATATTATTTTTATCATCTCGT
GATAATCCAATGGATCAAGTGATGAGTATGGAACTTGGCGCAGATGATTATATGCAAAAACCGTTCTATACCAATGTATT
AATTGCTAAATTACAAGCGATTTATCGTCGTGTCTATGAGTTTACAGCTGAAGAAAAACGTACATTGACTTGGCAAGATG
CTGTCGTTGATCTATCAAAAGATAGTATACAAAAAGGTGACGATACGATTTTTCTGTCCAAAACAGAAATGATTATATTA
GAAATTCTTATTACCAAAAAAAATCAAATCGTTTCGAGAGATACAATTATCACTGCATTATGGGATGATGAAGCATTTGT
TAGTGATAATACGTTAACAGTAAATGTGAATCGTTTACGAAAAAAATTATCTGAAATTAGTATGGATAGTGCAATCGAAA
CAAAAGTAGGAAAAGGATATATGGCTCATGAATAA


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure
  AlphaFold DB Q99VW2

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  braR Staphylococcus aureus N315

40.455

98.214

0.397