Detailed information    

insolico Bioinformatically predicted

Overview


Name   mecA   Type   Regulator
Locus tag   BI197_RS09500 Genome accession   NZ_CP017747
Coordinates   2020854..2021510 (-) Length   218 a.a.
NCBI ID   WP_003155032.1    Uniprot ID   I2C3J8
Organism   Bacillus velezensis strain SYBC H47     
Function   degradation of ComK (predicted from homology)   
Competence regulation

Genomic Context


Location: 2015854..2026510
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  BI197_RS09485 spxH 2016092..2016994 (+) 903 WP_003155024.1 protease adaptor protein SpxH -
  BI197_RS19610 - 2017280..2017447 (+) 168 WP_003155026.1 hypothetical protein -
  BI197_RS09490 pepF 2017485..2019314 (-) 1830 WP_003155028.1 oligoendopeptidase F Regulator
  BI197_RS09495 - 2019542..2020702 (-) 1161 WP_071391994.1 competence protein CoiA family protein -
  BI197_RS09500 mecA 2020854..2021510 (-) 657 WP_003155032.1 adaptor protein MecA Regulator
  BI197_RS09505 - 2021786..2022442 (+) 657 WP_003155033.1 TerC family protein -
  BI197_RS09510 spx 2022500..2022895 (-) 396 WP_003155034.1 transcriptional regulator Spx -
  BI197_RS09515 - 2023074..2023652 (-) 579 WP_003155035.1 GNAT family N-acetyltransferase -
  BI197_RS09520 - 2023770..2024957 (-) 1188 WP_071391995.1 putative glycoside hydrolase -
  BI197_RS09525 oppF 2025064..2025981 (-) 918 WP_070081625.1 oligopeptide ABC transporter ATP-binding protein OppF -

Sequence


Protein


Download         Length: 218 a.a.        Molecular weight: 25964.75 Da        Isoelectric Point: 4.1143

>NTDB_id=202449 BI197_RS09500 WP_003155032.1 2020854..2021510(-) (mecA) [Bacillus velezensis strain SYBC H47]
MEIERINEHTVKFYMSYGDIEDRGFDREEIWYNRERSEELFWEVMDEVHDEEEFAVEGPLWIQVQALDKGLEIIVTKAQL
SKDGQKLELPIPEDKKQEPADENLDALLDDFQKEEQAESREDKEQKLQFTLRFDDFEDLISLSKLNLNGIKTTLYSFEDR
YYLYADFYEQTDEEVENQLSILLEYAHESSVSIHRLEEYGKLVIADHALYTIKKHFAS

Nucleotide


Download         Length: 657 bp        

>NTDB_id=202449 BI197_RS09500 WP_003155032.1 2020854..2021510(-) (mecA) [Bacillus velezensis strain SYBC H47]
ATGGAAATAGAAAGAATTAATGAGCATACTGTAAAATTTTATATGTCTTATGGTGATATTGAAGATCGCGGTTTTGACAG
AGAAGAAATCTGGTACAATCGCGAGCGCAGTGAAGAACTGTTCTGGGAAGTCATGGATGAAGTGCATGATGAAGAGGAAT
TCGCTGTCGAGGGTCCTCTTTGGATTCAGGTTCAGGCATTGGACAAAGGACTGGAAATAATCGTAACAAAAGCCCAGCTT
TCCAAGGACGGACAAAAACTCGAACTGCCGATCCCGGAAGATAAAAAACAAGAGCCGGCAGATGAAAATCTCGATGCTTT
ACTTGATGATTTCCAGAAAGAAGAGCAGGCCGAGAGCCGGGAAGATAAGGAGCAAAAGCTTCAGTTCACTTTGCGGTTCG
ATGATTTTGAGGATCTCATCTCGCTATCAAAATTGAATCTTAACGGAATCAAAACGACCTTGTATTCGTTTGAAGACCGA
TATTATTTATATGCAGATTTTTATGAGCAAACTGATGAAGAGGTTGAAAATCAGCTAAGCATCCTGTTGGAGTACGCGCA
CGAATCATCAGTCAGCATTCACCGTCTTGAAGAATACGGCAAATTGGTGATCGCTGATCATGCGTTATATACAATAAAAA
AACACTTTGCATCATAA


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure
  AlphaFold DB I2C3J8

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  mecA Bacillus subtilis subsp. subtilis str. 168

89.45

100

0.895


Multiple sequence alignment