Detailed information    

insolico Bioinformatically predicted

Overview

Name   rok   Type   Regulator
Locus tag   BI197_RS08175 Genome accession   NZ_CP017747
Coordinates   1768761..1769357 (-) Length   198 a.a.
NCBI ID   WP_071391900.1    Uniprot ID   -
Organism   Bacillus velezensis strain SYBC H47     
Function   repression of comK (predicted from homology)   
Competence regulation

Genomic Context

Location: 1763761..1774357
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  BI197_RS08150 mobB 1764137..1764658 (-) 522 WP_041482361.1 molybdopterin-guanine dinucleotide biosynthesis protein B -
  BI197_RS08155 glp 1764619..1765911 (-) 1293 WP_071391896.1 gephyrin-like molybdotransferase Glp -
  BI197_RS08160 - 1765929..1766948 (-) 1020 WP_071391897.1 molybdopterin-synthase adenylyltransferase MoeB -
  BI197_RS08165 - 1767000..1767602 (-) 603 WP_071391898.1 molybdenum cofactor guanylyltransferase -
  BI197_RS08170 - 1767748..1768740 (+) 993 WP_071391899.1 sporulation protein -
  BI197_RS08175 rok 1768761..1769357 (-) 597 WP_071391900.1 transcriptional regulator Rok Regulator
  BI197_RS08180 - 1769809..1770267 (-) 459 WP_071391901.1 redoxin domain-containing protein -
  BI197_RS08185 - 1770554..1771360 (+) 807 WP_060386912.1 mechanosensitive ion channel family protein -
  BI197_RS08190 - 1771394..1771639 (-) 246 WP_003154596.1 YkuS family protein -
  BI197_RS08195 - 1771700..1772824 (-) 1125 WP_071391902.1 N-acetyldiaminopimelate deacetylase -
  BI197_RS08200 dapD 1772895..1773605 (-) 711 WP_007409623.1 2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N-acetyltransferase -
  BI197_RS08205 - 1773687..1774142 (-) 456 WP_071391903.1 flavodoxin -

Sequence

Protein


Download         Length: 198 a.a.        Molecular weight: 22597.64 Da        Isoelectric Point: 9.6909

>NTDB_id=202444 BI197_RS08175 WP_071391900.1 1768761..1769357(-) (rok) [Bacillus velezensis strain SYBC H47]
MFNEREALRLRLEQLNEAEVKVIREYQIERDKIYAKLRELDNTGSLSDTKKEFRPEKKNESLPVLAELAAQEMRSYQKPQ
TQPQSSQQQMQSITSLPAGIPDGSTRRRRGTARPGSKAAKLREAAIKTLKRHNAAIKSSELQKEIEKESGLEIPNMTTFM
QSLIKMYPEVKKPYRGQYILEGEISQETAETANDTAAE

Nucleotide


Download         Length: 597 bp        

>NTDB_id=202444 BI197_RS08175 WP_071391900.1 1768761..1769357(-) (rok) [Bacillus velezensis strain SYBC H47]
ATGTTTAATGAAAGAGAAGCGCTGCGCTTACGTTTAGAACAATTGAACGAAGCAGAGGTAAAAGTCATTCGTGAATATCA
AATAGAACGTGATAAAATATATGCAAAACTGAGAGAATTAGACAATACGGGCAGCCTGTCCGATACAAAAAAAGAGTTTC
GTCCGGAGAAAAAAAATGAATCCCTCCCGGTACTTGCAGAGCTTGCAGCACAGGAAATGAGAAGCTATCAAAAGCCGCAG
ACACAGCCTCAATCCTCCCAGCAGCAGATGCAGTCTATTACGTCTCTTCCCGCAGGCATTCCAGACGGTTCTACAAGAAG
AAGAAGAGGGACGGCGAGACCGGGATCGAAAGCGGCAAAACTGCGCGAAGCAGCGATTAAAACATTGAAACGCCACAATG
CAGCGATCAAAAGTTCCGAACTGCAAAAGGAAATTGAAAAGGAAAGCGGCCTTGAAATTCCTAATATGACAACATTTATG
CAAAGCTTAATTAAAATGTATCCGGAAGTGAAAAAACCATACCGCGGCCAATATATTCTTGAGGGAGAAATTTCTCAGGA
AACAGCAGAAACGGCAAATGATACGGCTGCTGAATAA

Domains


No domain identified.



Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  rok Bacillus subtilis subsp. subtilis str. 168

87.113

97.98

0.854

Multiple sequence alignment