Detailed information
Bioinformatically predicted
Overview
| Name | comGE | Type | Machinery gene |
| Locus tag | BI197_RS03780 | Genome accession | NZ_CP017747 |
| Coordinates | 747764..748078 (+) | Length | 104 a.a. |
| NCBI ID | WP_015388003.1 | Uniprot ID | - |
| Organism | Bacillus velezensis strain SYBC H47 | ||
| Function | dsDNA binding to the cell surface; assembly of the pseudopilus (predicted from homology) DNA binding and uptake |
||
Genomic Context
Location: 742764..753078
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| BI197_RS03755 | - | 743805..744755 (+) | 951 | WP_071391609.1 | magnesium transporter CorA family protein | - |
| BI197_RS03760 | comGA | 744946..746016 (+) | 1071 | WP_003153083.1 | competence type IV pilus ATPase ComGA | Machinery gene |
| BI197_RS03765 | comGB | 746003..747040 (+) | 1038 | WP_063174751.1 | competence type IV pilus assembly protein ComGB | Machinery gene |
| BI197_RS03770 | comGC | 747045..747353 (+) | 309 | WP_003153087.1 | competence type IV pilus major pilin ComGC | Machinery gene |
| BI197_RS03775 | comGD | 747343..747780 (+) | 438 | WP_025852922.1 | competence type IV pilus minor pilin ComGD | Machinery gene |
| BI197_RS03780 | comGE | 747764..748078 (+) | 315 | WP_015388003.1 | competence type IV pilus minor pilin ComGE | Machinery gene |
| BI197_RS03785 | comGF | 747987..748487 (+) | 501 | WP_230014462.1 | competence type IV pilus minor pilin ComGF | - |
| BI197_RS03790 | comGG | 748488..748865 (+) | 378 | WP_071391611.1 | competence type IV pilus minor pilin ComGG | Machinery gene |
| BI197_RS03795 | - | 748922..749101 (+) | 180 | WP_003153093.1 | YqzE family protein | - |
| BI197_RS03800 | - | 749141..749470 (-) | 330 | WP_071391612.1 | DUF3889 domain-containing protein | - |
| BI197_RS03805 | tapA | 749729..750400 (+) | 672 | WP_071391613.1 | amyloid fiber anchoring/assembly protein TapA | - |
| BI197_RS03810 | sipW | 750372..750956 (+) | 585 | WP_060562614.1 | signal peptidase I SipW | - |
| BI197_RS03815 | tasA | 751020..751805 (+) | 786 | WP_071391614.1 | biofilm matrix protein TasA | - |
| BI197_RS03820 | sinR | 751853..752188 (-) | 336 | WP_003153104.1 | transcriptional regulator SinR | Regulator |
| BI197_RS03825 | sinI | 752222..752395 (-) | 174 | WP_003153105.1 | anti-repressor SinI | Regulator |
Sequence
Protein
Download Length: 104 a.a. Molecular weight: 11844.85 Da Isoelectric Point: 6.9470
>NTDB_id=202431 BI197_RS03780 WP_015388003.1 747764..748078(+) (comGE) [Bacillus velezensis strain SYBC H47]
MLNGNKGFSTIETLSAMAIWLFLMTSIIPVWTGMLTDGLKIEDRQEAYQLLQKHISTYMMTGKKPPSPGVKWKEDGEYYK
VCAADRGEKEMCLSILKTDWLYAS
MLNGNKGFSTIETLSAMAIWLFLMTSIIPVWTGMLTDGLKIEDRQEAYQLLQKHISTYMMTGKKPPSPGVKWKEDGEYYK
VCAADRGEKEMCLSILKTDWLYAS
Nucleotide
Download Length: 315 bp
>NTDB_id=202431 BI197_RS03780 WP_015388003.1 747764..748078(+) (comGE) [Bacillus velezensis strain SYBC H47]
ATGCTAAACGGAAATAAGGGGTTCTCTACTATTGAAACACTATCAGCAATGGCCATTTGGCTGTTCCTTATGACGTCTAT
CATTCCGGTCTGGACGGGCATGCTGACAGATGGTCTGAAAATAGAAGATCGCCAGGAAGCGTACCAGCTTCTTCAGAAAC
ATATCAGCACTTATATGATGACCGGAAAAAAGCCGCCGTCTCCCGGTGTGAAGTGGAAGGAGGATGGTGAGTATTACAAA
GTGTGTGCGGCTGACCGCGGCGAAAAAGAAATGTGTCTCAGCATTCTCAAAACAGACTGGCTTTACGCTTCTTAA
ATGCTAAACGGAAATAAGGGGTTCTCTACTATTGAAACACTATCAGCAATGGCCATTTGGCTGTTCCTTATGACGTCTAT
CATTCCGGTCTGGACGGGCATGCTGACAGATGGTCTGAAAATAGAAGATCGCCAGGAAGCGTACCAGCTTCTTCAGAAAC
ATATCAGCACTTATATGATGACCGGAAAAAAGCCGCCGTCTCCCGGTGTGAAGTGGAAGGAGGATGGTGAGTATTACAAA
GTGTGTGCGGCTGACCGCGGCGAAAAAGAAATGTGTCTCAGCATTCTCAAAACAGACTGGCTTTACGCTTCTTAA
Domains
No domain identified.
3D structure
| Source | ID | Structure |
|---|
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| comGE | Bacillus subtilis subsp. subtilis str. 168 |
43.478 |
100 |
0.481 |