Detailed information    

insolico Bioinformatically predicted

Overview

Name   luxS   Type   Regulator
Locus tag   CHY23_RS01170 Genome accession   NZ_CP022715
Coordinates   240816..241325 (-) Length   169 a.a.
NCBI ID   WP_005598178.1    Uniprot ID   A3N1L8
Organism   Actinobacillus pleuropneumoniae strain KL 16     
Function   induction of competence (predicted from homology)   
Competence regulation

Genomic Context

Location: 235816..246325
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  CHY23_RS01145 (CHY23_00228) tehA 236284..237234 (-) 951 WP_005598173.1 dicarboxylate transporter/tellurite-resistance protein TehA -
  CHY23_RS01150 (CHY23_00229) hxpB 237330..237980 (-) 651 WP_005598175.1 hexitol phosphatase HxpB -
  CHY23_RS11685 - 238218..238779 (-) 562 Protein_225 flavin reductase family protein -
  CHY23_RS01165 (CHY23_00232) - 238866..240710 (-) 1845 WP_005598177.1 ABC transporter ATP-binding protein -
  CHY23_RS01170 (CHY23_00233) luxS 240816..241325 (-) 510 WP_005598178.1 S-ribosylhomocysteine lyase Regulator
  CHY23_RS01175 (CHY23_00234) - 241380..244046 (-) 2667 WP_005598181.1 PqiB family protein -
  CHY23_RS01180 (CHY23_00235) fur 244194..244643 (-) 450 WP_005598183.1 ferric iron uptake transcriptional regulator -
  CHY23_RS01185 (CHY23_00236) fldA 244674..245198 (-) 525 WP_005598185.1 flavodoxin FldA -
  CHY23_RS01190 (CHY23_00237) ybfE 245220..245504 (-) 285 WP_005620439.1 LexA regulated protein -
  CHY23_RS01195 (CHY23_00238) ybaK 245713..246189 (-) 477 WP_005598189.1 Cys-tRNA(Pro)/Cys-tRNA(Cys) deacylase YbaK -

Sequence

Protein


Download         Length: 169 a.a.        Molecular weight: 18869.63 Da        Isoelectric Point: 5.2621

>NTDB_id=202371 CHY23_RS01170 WP_005598178.1 240816..241325(-) (luxS) [Actinobacillus pleuropneumoniae strain KL 16]
MPLLDSFKVDHTRMNAPAVRVAKTMTTPKGDTITVFDLRFCRPNIDILPVRGIHTMEHLFAGFMRDHLNSESVEIIDISP
MGCRTGFYMSLIGAPSEADVVSAWTKSMEDALNKVPDVSKIPELNEYQCGSYKEHSLEEAHQIARDVLAKGIGVNRNEDL
ALDEKLLNP

Nucleotide


Download         Length: 510 bp        

>NTDB_id=202371 CHY23_RS01170 WP_005598178.1 240816..241325(-) (luxS) [Actinobacillus pleuropneumoniae strain KL 16]
ATGCCTTTATTAGATAGCTTTAAAGTGGATCACACTCGTATGAACGCACCGGCAGTGCGTGTTGCAAAAACGATGACGAC
GCCGAAGGGCGATACGATTACCGTATTCGATTTACGTTTTTGCCGTCCGAATATTGATATTTTACCGGTGCGTGGTATCC
ACACGATGGAACACTTATTTGCCGGCTTTATGCGTGATCATTTAAATAGTGAAAGTGTAGAAATTATTGATATTTCGCCG
ATGGGTTGCCGTACCGGTTTCTATATGTCGTTAATCGGTGCGCCAAGCGAAGCGGATGTGGTTTCGGCGTGGACAAAATC
GATGGAAGATGCTTTAAATAAAGTACCGGACGTGTCAAAAATTCCGGAATTAAACGAATATCAATGCGGCTCTTATAAAG
AGCATTCGCTTGAAGAAGCGCATCAAATCGCTCGTGATGTGTTAGCCAAGGGTATCGGCGTAAACCGTAACGAAGATTTA
GCGCTTGATGAGAAATTATTAAATCCATAA

Domains

Predicted by InterProScan.

S-Ribosylhomocysteinase (LuxS) (LuxS)

(4-153)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB A3N1L8

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  luxS Vibrio cholerae strain A1552

73.214

99.408

0.728