Detailed information
Bioinformatically predicted
Overview
| Name | sxy/tfoX | Type | Regulator |
| Locus tag | RM34_RS01640 | Genome accession | NZ_CP022689 |
| Coordinates | 156570..157199 (-) | Length | 209 a.a. |
| NCBI ID | WP_000839159.1 | Uniprot ID | Q8XD96 |
| Organism | Escherichia coli strain CDC#03-98 | ||
| Function | positive regulator of competence gene (predicted from homology) Competence regulation |
||
Genomic Context
Location: 151570..162199
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| RM34_RS01625 (RM34_01625) | helD | 151812..153866 (-) | 2055 | WP_001301436.1 | DNA helicase IV | - |
| RM34_RS01630 (RM34_01630) | yccF | 153989..154435 (+) | 447 | WP_001261230.1 | YccF domain-containing protein | - |
| RM34_RS01635 (RM34_01635) | yccS | 154445..156607 (+) | 2163 | WP_000875023.1 | YccS family putative transporter | - |
| RM34_RS01640 (RM34_01640) | sxy/tfoX | 156570..157199 (-) | 630 | WP_000839159.1 | CRP-S regulon transcriptional coactivator Sxy | Regulator |
| RM34_RS01645 (RM34_01645) | sulA | 157418..157927 (+) | 510 | WP_000288710.1 | SOS-induced cell division inhibitor SulA | - |
| RM34_RS01655 (RM34_01655) | ompA | 158284..159324 (+) | 1041 | WP_000750416.1 | porin OmpA | - |
| RM34_RS01660 (RM34_01660) | matP | 159400..159852 (-) | 453 | WP_000877161.1 | macrodomain Ter protein MatP | - |
| RM34_RS01665 (RM34_01665) | ycbZ | 160038..161798 (+) | 1761 | WP_000156526.1 | Lon protease family protein | - |
Sequence
Protein
Download Length: 209 a.a. Molecular weight: 24173.05 Da Isoelectric Point: 9.1942
>NTDB_id=202204 RM34_RS01640 WP_000839159.1 156570..157199(-) (sxy/tfoX) [Escherichia coli strain CDC#03-98]
MKSLSYKRIYKSQEYLATLGTIEYRSLFGSYSLTVDDTVFAMVSDGELYLRACEQSAQYCVKYPPVWLTYKKCGRSVTLN
YYRVDESLWRNQLKLVRLSKYSLDAALKEKSTRNTRERLKDLPNMSFHLEAILGEVGIKDVRALRILGAKMCWLRLRQQN
SLVTEKILFMLEGAIIGIHEAALPVARRQELAEWADSLTPKQEFPAELE
MKSLSYKRIYKSQEYLATLGTIEYRSLFGSYSLTVDDTVFAMVSDGELYLRACEQSAQYCVKYPPVWLTYKKCGRSVTLN
YYRVDESLWRNQLKLVRLSKYSLDAALKEKSTRNTRERLKDLPNMSFHLEAILGEVGIKDVRALRILGAKMCWLRLRQQN
SLVTEKILFMLEGAIIGIHEAALPVARRQELAEWADSLTPKQEFPAELE
Nucleotide
Download Length: 630 bp
>NTDB_id=202204 RM34_RS01640 WP_000839159.1 156570..157199(-) (sxy/tfoX) [Escherichia coli strain CDC#03-98]
ATGAAAAGCCTCTCCTATAAGCGGATCTATAAATCACAAGAATACCTGGCAACGTTGGGCACAATTGAATACCGATCATT
GTTTGGCAGTTACAGCCTGACCGTTGACGACACGGTGTTTGCGATGGTTTCTGATGGTGAGTTGTATCTTCGGGCTTGTG
AGCAAAGTGCACAGTACTGTGTAAAATATCCGCCTGTCTGGCTGACATATAAAAAGTGTGGCCGATCCGTTACCCTCAAT
TACTATCGGGTTGATGAAAGTCTATGGCGAAATCAACTGAAGCTGGTGCGTCTGTCGAAATATTCTCTCGATGCAGCGCT
GAAAGAGAAAAGCACGCGCAATACCCGGGAAAGACTGAAAGATTTGCCCAATATGTCTTTTCATCTGGAAGCGATTCTCG
GGGAGGTGGGGATTAAGGATGTACGGGCGTTACGTATACTTGGGGCAAAAATGTGTTGGTTGCGACTGCGGCAGCAAAAC
AGTCTGGTGACAGAAAAGATTCTGTTTATGCTTGAAGGTGCCATTATCGGCATTCATGAAGCTGCGCTCCCGGTGGCACG
CCGCCAGGAGCTTGCAGAATGGGCTGACTCTCTTACGCCGAAACAGGAGTTTCCTGCGGAACTTGAGTAA
ATGAAAAGCCTCTCCTATAAGCGGATCTATAAATCACAAGAATACCTGGCAACGTTGGGCACAATTGAATACCGATCATT
GTTTGGCAGTTACAGCCTGACCGTTGACGACACGGTGTTTGCGATGGTTTCTGATGGTGAGTTGTATCTTCGGGCTTGTG
AGCAAAGTGCACAGTACTGTGTAAAATATCCGCCTGTCTGGCTGACATATAAAAAGTGTGGCCGATCCGTTACCCTCAAT
TACTATCGGGTTGATGAAAGTCTATGGCGAAATCAACTGAAGCTGGTGCGTCTGTCGAAATATTCTCTCGATGCAGCGCT
GAAAGAGAAAAGCACGCGCAATACCCGGGAAAGACTGAAAGATTTGCCCAATATGTCTTTTCATCTGGAAGCGATTCTCG
GGGAGGTGGGGATTAAGGATGTACGGGCGTTACGTATACTTGGGGCAAAAATGTGTTGGTTGCGACTGCGGCAGCAAAAC
AGTCTGGTGACAGAAAAGATTCTGTTTATGCTTGAAGGTGCCATTATCGGCATTCATGAAGCTGCGCTCCCGGTGGCACG
CCGCCAGGAGCTTGCAGAATGGGCTGACTCTCTTACGCCGAAACAGGAGTTTCCTGCGGAACTTGAGTAA
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| sxy/tfoX | Escherichia coli BW25113 strain K-12 |
99.522 |
100 |
0.995 |