Detailed information    

insolico Bioinformatically predicted

Overview

Name   ceuB   Type   Machinery gene
Locus tag   BS1321_RS14175 Genome accession   NZ_CP017704
Coordinates   2971870..2972820 (+) Length   316 a.a.
NCBI ID   WP_063233993.1    Uniprot ID   A0A223EI42
Organism   Peribacillus simplex NBRC 15720 = DSM 1321     
Function   DNA uptake (predicted from homology)   
DNA binding and uptake

Genomic Context

Location: 2966870..2977820
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  BS1321_RS14160 (BS1321_13950) shc 2967330..2969225 (-) 1896 WP_063233991.1 squalene--hopene cyclase -
  BS1321_RS14165 (BS1321_13955) - 2969394..2971043 (-) 1650 WP_063233992.1 M14 family metallopeptidase -
  BS1321_RS14170 (BS1321_13960) - 2971263..2971604 (-) 342 WP_230159839.1 DUF1450 domain-containing protein -
  BS1321_RS14175 (BS1321_13965) ceuB 2971870..2972820 (+) 951 WP_063233993.1 ABC transporter permease Machinery gene
  BS1321_RS14180 (BS1321_13970) - 2972813..2973760 (+) 948 WP_063233994.1 iron chelate uptake ABC transporter family permease subunit -
  BS1321_RS14185 (BS1321_13975) - 2973754..2974512 (+) 759 WP_063233995.1 ABC transporter ATP-binding protein -
  BS1321_RS14190 (BS1321_13980) - 2974725..2975669 (+) 945 WP_174524176.1 siderophore ABC transporter substrate-binding protein -

Sequence

Protein


Download         Length: 316 a.a.        Molecular weight: 34880.18 Da        Isoelectric Point: 9.5025

>NTDB_id=202054 BS1321_RS14175 WP_063233993.1 2971870..2972820(+) (ceuB) [Peribacillus simplex NBRC 15720 = DSM 1321]
MKIRYLVMALVVLSFTSLFIGVKDITPLDLLDLSDDKVQIMLQSRFPRMVTIVIAGIVMSISGLIMQQLSRNKFVSPTTA
GTMDSARLGLLLAIIIFPSAALIEKMAFAFIFALAGTFLFMKILDQVKYKDTIFIPLVGLMFGNIVGSISTFFAYKYDLI
QSLNTWMNGDFSMIMSGRYELIYVSIPLVILAYFFANKFTVAGMGEEFAINLGLNYKLIVNFGLIIVALSSTVVLLTVGT
IPFIGLIVPNIVSLYLGDNLKKSLSHTALLGAVFLLICDILGRILIYPFEIPIGLVVGVIGSAVFIYLILRRKAYE

Nucleotide


Download         Length: 951 bp        

>NTDB_id=202054 BS1321_RS14175 WP_063233993.1 2971870..2972820(+) (ceuB) [Peribacillus simplex NBRC 15720 = DSM 1321]
ATGAAGATAAGATATTTAGTCATGGCGTTAGTTGTTTTATCATTTACGTCATTATTCATTGGTGTAAAAGATATTACCCC
CTTGGATTTATTGGATCTAAGTGATGATAAAGTGCAAATCATGCTGCAAAGCCGTTTCCCCAGAATGGTGACCATAGTCA
TTGCCGGTATTGTGATGAGTATAAGCGGTCTGATCATGCAGCAATTGAGCCGCAATAAATTTGTATCCCCGACGACTGCC
GGAACCATGGATTCTGCAAGGCTTGGACTTCTTCTTGCCATTATCATTTTTCCATCGGCAGCACTTATTGAGAAAATGGC
ATTCGCTTTCATATTCGCTTTGGCAGGTACATTCTTGTTCATGAAAATTCTTGATCAAGTGAAATATAAGGATACGATTT
TCATTCCATTGGTTGGTTTGATGTTTGGTAATATCGTCGGATCCATCTCGACTTTCTTTGCCTATAAATATGATTTGATT
CAAAGCCTCAACACTTGGATGAATGGGGATTTCTCGATGATCATGTCGGGAAGGTATGAACTTATATATGTAAGTATCCC
TCTAGTCATTCTCGCATACTTCTTTGCCAATAAATTCACTGTGGCAGGGATGGGTGAGGAGTTTGCTATCAATCTAGGAC
TCAATTATAAGCTTATAGTCAATTTTGGGTTGATCATCGTGGCATTATCCTCCACTGTCGTTTTGTTAACGGTGGGAACG
ATTCCTTTCATAGGATTGATCGTACCAAATATTGTATCTCTTTACCTTGGTGACAATTTGAAAAAGAGTCTTTCTCATAC
AGCATTACTAGGGGCAGTATTCCTATTGATCTGCGATATTCTGGGCAGGATCCTCATATATCCATTTGAAATCCCGATCG
GACTCGTGGTTGGTGTCATAGGAAGCGCCGTATTTATCTATCTGATACTGAGGAGAAAGGCATATGAATAA

Domains

Predicted by InterproScan.

FecCD transport family (FecCD)

(10-311)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB A0A223EI42

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  ceuB Campylobacter jejuni subsp. jejuni 81-176

50

100

0.5

Multiple sequence alignment