Detailed information    

insolico Bioinformatically predicted

Overview


Name   braR   Type   Regulator
Locus tag   CGP84_RS03525 Genome accession   NZ_CP022682
Coordinates   698402..699076 (+) Length   224 a.a.
NCBI ID   WP_001166496.1    Uniprot ID   Q2YSS2
Organism   Staphylococcus aureus strain 78     
Function   promote expression of competence genes (predicted from homology)   
Competence regulation

Genomic Context


Location: 693402..704076
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  CGP84_RS03500 (CGP84_00635) - 693624..694691 (+) 1068 WP_000980142.1 membrane protein -
  CGP84_RS03505 (CGP84_00636) - 694842..695885 (+) 1044 WP_001030757.1 alpha/beta hydrolase -
  CGP84_RS03510 (CGP84_00637) - 696214..696642 (+) 429 Protein_654 hypothetical protein -
  CGP84_RS03515 (CGP84_00638) - 696844..697350 (-) 507 WP_115288356.1 GNAT family N-acetyltransferase -
  CGP84_RS03520 (CGP84_00639) graX 697463..698386 (+) 924 WP_047213222.1 auxiliary protein GraX/ApsX -
  CGP84_RS03525 (CGP84_00640) braR 698402..699076 (+) 675 WP_001166496.1 response regulator transcription factor GraR/ApsR Regulator
  CGP84_RS03530 (CGP84_00641) graS 699069..700109 (+) 1041 WP_001061247.1 histidine kinase GraS/ApsS -
  CGP84_RS03535 (CGP84_00642) vraF 700253..701014 (+) 762 WP_000985996.1 ABC transporter ATP-binding protein VraF -
  CGP84_RS03540 (CGP84_00643) vraG 701004..702893 (+) 1890 WP_000143606.1 ABC transporter permease VraG -

Sequence


Protein


Download         Length: 224 a.a.        Molecular weight: 26093.93 Da        Isoelectric Point: 4.3563

>NTDB_id=202039 CGP84_RS03525 WP_001166496.1 698402..699076(+) (braR) [Staphylococcus aureus strain 78]
MQILLVEDDNTLFQELKKELEQWDFNVAGIEDFGKVMDTFESFNPEIVILDVQLPKYDGFYWCRKMREVSNVPILFLSSR
DNPMDQVMSMELGADDYMQKPFYTNVLIAKLQAIYRRVYEFTAEEKRTLTWQDAIIDLSKDSIQKGDDTIFLSKTEMIIL
EILITKKNQIVSRDTIITALWDDEAFVSDNTLTVNVNRLRKKLSEISMDSAIETKVGKGYMAHE

Nucleotide


Download         Length: 675 bp        

>NTDB_id=202039 CGP84_RS03525 WP_001166496.1 698402..699076(+) (braR) [Staphylococcus aureus strain 78]
ATGCAAATACTACTAGTAGAAGATGACAATACTTTGTTTCAAGAATTGAAAAAAGAATTAGAACAATGGGATTTTAATGT
TGCTGGTATTGAAGATTTCGGCAAAGTAATGGATACATTTGAAAGTTTTAATCCTGAAATTGTTATATTGGATGTTCAAT
TACCTAAATATGATGGGTTTTATTGGTGCAGAAAAATGAGAGAAGTTTCCAACGTACCAATATTATTTTTATCATCTCGT
GATAATCCAATGGATCAAGTGATGAGTATGGAACTTGGCGCAGATGATTATATGCAAAAGCCTTTTTATACAAATGTATT
AATTGCTAAATTACAAGCGATTTATCGACGAGTGTATGAATTTACTGCTGAAGAAAAACGCACGTTAACATGGCAAGATG
CCATTATAGATCTATCAAAAGATAGTATACAAAAAGGTGACGATACGATTTTTCTATCCAAAACAGAAATGATTATATTA
GAAATTCTTATTACCAAAAAAAATCAAATCGTTTCGAGAGATACAATTATCACTGCATTATGGGATGATGAAGCATTTGT
TAGTGATAATACGTTAACAGTAAATGTGAATCGTTTACGAAAAAAATTATCTGAAATAAGTATGGATAGTGCAATCGAAA
CAAAAGTAGGAAAAGGATATATGGCTCATGAATAA


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure
  AlphaFold DB Q2YSS2

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  braR Staphylococcus aureus N315

40.455

98.214

0.397