Detailed information    

insolico Bioinformatically predicted

Overview

Name   pepF   Type   Regulator
Locus tag   BS1321_RS06075 Genome accession   NZ_CP017704
Coordinates   1292990..1294807 (-) Length   605 a.a.
NCBI ID   WP_063232177.1    Uniprot ID   A0A223EE74
Organism   Peribacillus simplex NBRC 15720 = DSM 1321     
Function   degradation of XIP; competence shut-off (predicted from homology)   
Competence regulation

Genomic Context

Location: 1287990..1299807
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  BS1321_RS06045 (BS1321_05935) - 1288318..1288938 (-) 621 WP_034314484.1 GTP pyrophosphokinase -
  BS1321_RS06050 (BS1321_05940) - 1289258..1289836 (+) 579 WP_063232172.1 CYTH domain-containing protein -
  BS1321_RS06055 (BS1321_05945) - 1289859..1290524 (+) 666 WP_311631683.1 lytic transglycosylase domain-containing protein -
  BS1321_RS06060 (BS1321_05950) - 1290757..1291161 (+) 405 WP_063232174.1 globin -
  BS1321_RS06065 (BS1321_05955) - 1291158..1292051 (+) 894 WP_063232175.1 ClpXP adapter SpxH family protein -
  BS1321_RS06075 (BS1321_05965) pepF 1292990..1294807 (-) 1818 WP_063232177.1 oligoendopeptidase F Regulator
  BS1321_RS06080 (BS1321_05970) - 1295004..1296212 (-) 1209 WP_063232178.1 competence protein CoiA -
  BS1321_RS06085 (BS1321_05975) cls 1296306..1297814 (-) 1509 WP_063232179.1 cardiolipin synthase -
  BS1321_RS06090 (BS1321_05980) mecA 1297931..1298599 (-) 669 WP_063232180.1 adaptor protein MecA -
  BS1321_RS06095 (BS1321_05985) spxA 1299093..1299488 (-) 396 WP_034314502.1 transcriptional regulator SpxA -

Sequence

Protein


Download         Length: 605 a.a.        Molecular weight: 69808.24 Da        Isoelectric Point: 4.7362

>NTDB_id=202028 BS1321_RS06075 WP_063232177.1 1292990..1294807(-) (pepF) [Peribacillus simplex NBRC 15720 = DSM 1321]
MAQKTKANTLPSRSEIAPEDTWRLEDIFATEEDWEAAFKAVKEDLKKAEAHKGTLGESAEKLFAALQLQDEVFEKLGKVY
SYSHMRNDQDTTNPFYQGMEDRAKALYAQAAAAFSYMVPELLSIDESKVEGFLEEKEELKLYKHSLEEINLQRPHILSAE
QEELLAQASEVLDASGNTFGMLNNADLKFPTIKDEEGNEVEITHGRYISFLESEDRRVREEAFKGVYSKYGEFRNTFAST
LSGEVKNHNFNATVRKYDSARQAALSNNNIPETVYDNLVKTVNDNLPLLHRYLDLRKKVLQLDELHMYDLFTPLVKEVKM
EVTYDEAKDYVLKGLAPLGEDYLNVLKEGFENRWVDVHENKGKRSGAYSSGTYGTNPYILMNWQNNVNNLFTLVHEFGHS
VHSYYTRKYQPYPYGNYSIFVAEVASTCNENLLNDYLLNSIEDEKKRIYLLNHYLEGFRGTLFRQTMFAEFEHTIHLKAQ
NGEALTADMLTKEYYELNKKYFGENVTIDEEIGLEWARIPHFYYNYYVYQYATGISAATALSKQILEEGEPAVKRYLEFL
KSGSSDYPIEVLKKAGVDMTKSEPVQEAMNVFEEKLNELEELLNK

Nucleotide


Download         Length: 1818 bp        

>NTDB_id=202028 BS1321_RS06075 WP_063232177.1 1292990..1294807(-) (pepF) [Peribacillus simplex NBRC 15720 = DSM 1321]
ATGGCACAGAAAACAAAAGCGAATACATTACCCTCAAGAAGTGAAATAGCTCCTGAAGATACTTGGAGACTGGAAGATAT
CTTCGCAACCGAGGAAGATTGGGAAGCGGCCTTCAAAGCGGTAAAGGAAGACCTCAAGAAAGCGGAGGCACATAAAGGGA
CGTTGGGAGAAAGCGCAGAAAAATTATTTGCGGCCCTTCAACTCCAAGATGAAGTATTCGAGAAGCTAGGGAAAGTTTAT
TCTTATTCACATATGCGCAATGATCAAGATACAACCAATCCTTTTTATCAAGGGATGGAGGATCGGGCAAAAGCTTTATA
CGCCCAGGCAGCAGCTGCGTTTTCATATATGGTTCCTGAACTATTGAGTATTGACGAAAGCAAAGTGGAAGGGTTTTTGG
AAGAAAAAGAAGAATTGAAATTATATAAACATTCTTTAGAGGAAATTAATCTTCAGAGACCCCATATTTTATCTGCAGAA
CAGGAAGAATTATTGGCCCAAGCATCAGAAGTACTCGATGCATCGGGCAATACTTTCGGAATGCTTAACAATGCCGATTT
GAAATTCCCGACCATCAAGGATGAAGAGGGAAATGAAGTGGAAATAACTCACGGAAGGTATATTAGTTTTCTTGAGAGTG
AAGATCGCCGTGTACGTGAGGAGGCATTTAAAGGGGTATATAGCAAGTATGGGGAGTTCCGTAATACATTTGCTTCAACC
CTGTCAGGTGAGGTGAAAAACCACAACTTCAATGCCACGGTTCGAAAATATGATTCAGCACGCCAAGCGGCGTTAAGTAA
TAATAACATTCCGGAGACCGTATACGATAATCTCGTTAAAACGGTCAATGACAACTTGCCATTACTGCACCGTTATCTTG
ATTTACGTAAAAAAGTACTGCAATTAGATGAACTTCATATGTATGATCTATTCACTCCTCTTGTTAAAGAAGTGAAGATG
GAGGTGACATATGACGAGGCCAAAGATTATGTCCTAAAAGGTCTTGCTCCGCTTGGGGAGGACTATTTGAACGTTTTGAA
AGAAGGATTTGAAAACCGTTGGGTCGATGTGCATGAAAATAAAGGGAAACGAAGTGGTGCCTATTCTTCTGGTACATACG
GGACGAATCCTTATATTTTAATGAACTGGCAAAATAACGTCAATAACTTATTCACGCTCGTTCATGAGTTTGGGCATTCG
GTCCATAGCTACTATACACGTAAATATCAGCCATATCCATACGGGAATTATTCAATATTTGTAGCGGAAGTTGCATCGAC
TTGTAATGAAAACCTGTTGAATGATTATTTACTGAATTCAATCGAAGATGAAAAGAAACGCATCTATTTATTGAATCATT
ACCTGGAAGGTTTCCGTGGCACATTGTTCCGACAAACGATGTTTGCAGAGTTTGAACATACCATTCATTTAAAGGCTCAA
AATGGGGAAGCGTTGACAGCGGATATGCTTACTAAGGAATATTATGAGCTGAACAAGAAATACTTTGGCGAGAACGTGAC
TATTGATGAAGAAATCGGTTTGGAATGGGCTCGTATTCCACATTTCTACTATAATTACTATGTTTATCAATATGCAACTG
GAATCAGTGCAGCAACAGCATTGAGCAAGCAAATCCTTGAAGAAGGAGAGCCTGCTGTCAAAAGGTATCTGGAGTTCTTG
AAGTCAGGAAGTTCCGATTATCCGATTGAAGTACTCAAAAAGGCTGGCGTTGATATGACAAAATCCGAGCCTGTACAAGA
AGCCATGAATGTATTCGAAGAAAAATTAAATGAGTTGGAAGAGCTTTTGAATAAATAG

Domains

Predicted by InterproScan.

Peptidase family M3 (Peptidase_M3)

(210-590)

Oligopeptidase F (Peptidase_M3_N)

(120-189)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB A0A223EE74

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  pepF Streptococcus salivarius strain HSISS4

50.673

98.182

0.498

Multiple sequence alignment