Detailed information    

insolico Bioinformatically predicted

Overview

Name   med   Type   Regulator
Locus tag   AP3564_RS10285 Genome accession   NZ_CP017703
Coordinates   2077605..2078555 (+) Length   316 a.a.
NCBI ID   WP_094245342.1    Uniprot ID   A0A223E5H4
Organism   Aeribacillus pallidus strain KCTC3564     
Function   regulation of regulators (predicted from homology)   
Competence regulation

Genomic Context

Location: 2072605..2083555
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  AP3564_RS10270 (AP3564_10075) - 2075277..2075459 (-) 183 WP_063387013.1 YjzD family protein -
  AP3564_RS10275 (AP3564_10080) - 2075606..2076342 (+) 737 Protein_1927 hypothetical protein -
  AP3564_RS10280 (AP3564_10085) - 2076482..2077330 (+) 849 WP_094245341.1 NAD(P)-dependent oxidoreductase -
  AP3564_RS10285 (AP3564_10090) med 2077605..2078555 (+) 951 WP_094245342.1 BMP family ABC transporter substrate-binding protein Regulator
  AP3564_RS10290 (AP3564_10095) - 2078602..2078874 (-) 273 WP_063387009.1 hypothetical protein -
  AP3564_RS10295 (AP3564_10100) - 2079088..2080020 (+) 933 WP_063387008.1 beta-ketoacyl-ACP synthase III -
  AP3564_RS10300 (AP3564_10105) fabF 2080090..2081334 (+) 1245 WP_063387007.1 beta-ketoacyl-ACP synthase II -
  AP3564_RS10310 (AP3564_10110) - 2082109..2082888 (+) 780 WP_063387006.1 DUF2268 domain-containing protein -

Sequence

Protein


Download         Length: 316 a.a.        Molecular weight: 35619.76 Da        Isoelectric Point: 4.8537

>NTDB_id=202002 AP3564_RS10285 WP_094245342.1 2077605..2078555(+) (med) [Aeribacillus pallidus strain KCTC3564]
MYKKMFVIIFILLFLVGCGQASEKGKLKKVGLLVPETINDQVWGTKGYKGLLKIQSELNVDVFYKEGMNSEAAVREAVEE
FHGKGVNLIIGHGHEYEGFFRDLLDQYPDIHFVFFNGDAKGPNATSLNFEAHAMGFFAGMVAAHMTKTNEIGIIAAFEWQ
PEVEGFYQGAQFENPNVTIHIEYVQGFDHVDLALEKLDKLVAENVDVVYPAGDRYNVPVIEKVKEKGIYSIGFVSDQSDL
GEQMVLTSTVQHVDELYLLVTKKFIKGELESGNLYFDFQDGVIDLGKFSPLVDKEFKNKVLKYVEEYKKTGKLPNE

Nucleotide


Download         Length: 951 bp        

>NTDB_id=202002 AP3564_RS10285 WP_094245342.1 2077605..2078555(+) (med) [Aeribacillus pallidus strain KCTC3564]
ATGTATAAAAAAATGTTTGTGATCATTTTTATTTTATTATTTCTCGTTGGCTGCGGACAAGCATCAGAAAAAGGAAAACT
GAAAAAGGTGGGTTTGCTCGTTCCTGAAACGATTAATGATCAAGTTTGGGGGACAAAAGGGTATAAAGGGCTGTTAAAAA
TTCAGTCTGAGCTGAATGTAGATGTTTTTTATAAAGAAGGAATGAATTCCGAAGCGGCGGTGAGGGAGGCGGTCGAAGAA
TTTCACGGAAAGGGAGTTAATTTAATTATCGGGCACGGTCACGAATATGAGGGTTTTTTTAGAGATTTGCTGGATCAATA
TCCAGATATTCATTTCGTTTTTTTTAATGGTGATGCAAAAGGCCCGAATGCCACAAGTTTAAATTTTGAGGCGCATGCCA
TGGGCTTTTTCGCAGGAATGGTGGCAGCACATATGACAAAAACAAACGAAATCGGAATTATTGCCGCTTTTGAGTGGCAG
CCTGAAGTGGAGGGGTTTTATCAAGGGGCGCAATTTGAAAATCCAAACGTAACCATTCACATTGAATATGTCCAAGGGTT
TGATCATGTTGACTTGGCGCTTGAGAAGCTCGATAAGCTTGTCGCAGAAAATGTAGATGTTGTTTATCCGGCAGGCGACA
GATACAACGTGCCTGTGATCGAAAAAGTGAAGGAAAAAGGAATATATTCAATTGGCTTTGTTTCAGATCAAAGTGATTTG
GGCGAACAAATGGTTTTAACAAGCACAGTACAGCATGTGGATGAGTTGTATTTATTAGTCACAAAAAAATTTATAAAAGG
CGAACTGGAAAGCGGGAATTTATATTTTGATTTTCAAGATGGTGTGATTGATTTAGGGAAGTTCAGCCCTCTAGTAGATA
AAGAATTTAAAAATAAAGTTTTAAAATATGTGGAAGAATATAAGAAAACAGGGAAATTGCCTAACGAATAA

Domains

Predicted by InterproScan.

ABC transporter substrate-binding protein PnrA-like (Bmp)

(28-314)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB A0A223E5H4

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  med Bacillus subtilis subsp. subtilis str. 168

53.185

99.367

0.528

Multiple sequence alignment