Detailed information    

insolico Bioinformatically predicted

Overview

Name   agrA   Type   Regulator
Locus tag   FORC61_RS10425 Genome accession   NZ_CP022607
Coordinates   2022470..2023186 (+) Length   238 a.a.
NCBI ID   WP_000688492.1    Uniprot ID   P0A0I7
Organism   Staphylococcus aureus strain FORC_061     
Function   promote expression of competence genes (predicted from homology)   
Competence regulation

Genomic Context

Location: 2017470..2028186
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  FORC61_RS10395 (FORC61_1838) - 2017686..2018312 (+) 627 WP_000522384.1 nitroreductase family protein -
  FORC61_RS10400 (FORC61_1839) - 2018673..2019458 (+) 786 WP_000867942.1 carbon-nitrogen family hydrolase -
  FORC61_RS14485 (FORC61_1840) - 2020058..2020192 (-) 135 WP_001549197.1 delta-lysin family phenol-soluble modulin -
  FORC61_RS10410 (FORC61_1841) agrB 2020428..2020997 (+) 570 WP_001105707.1 accessory gene regulator AgrB -
  FORC61_RS10415 (FORC61_1842) - 2020994..2021134 (+) 141 WP_001093929.1 cyclic lactone autoinducer peptide -
  FORC61_RS10420 - 2021159..2022451 (+) 1293 WP_001789596.1 GHKL domain-containing protein -
  FORC61_RS10425 (FORC61_1844) agrA 2022470..2023186 (+) 717 WP_000688492.1 LytTR family DNA-binding domain-containing protein Regulator
  FORC61_RS10430 - 2023258..2023367 (+) 110 Protein_1933 hypothetical protein -
  FORC61_RS10435 (FORC61_1845) - 2023555..2024514 (-) 960 WP_001253305.1 carbohydrate kinase -
  FORC61_RS10440 (FORC61_1846) - 2024511..2025995 (-) 1485 WP_114967490.1 sucrose-6-phosphate hydrolase -
  FORC61_RS10445 (FORC61_1847) - 2026144..2027094 (-) 951 WP_000790325.1 LacI family DNA-binding transcriptional regulator -

Sequence

Protein


Download         Length: 238 a.a.        Molecular weight: 27905.90 Da        Isoelectric Point: 6.0927

>NTDB_id=201935 FORC61_RS10425 WP_000688492.1 2022470..2023186(+) (agrA) [Staphylococcus aureus strain FORC_061]
MKIFICEDDPKQRENMVTIIKNYIMIEEKPMEIALATDNPYEVLEQAKNMNDIGCYFLDIQLSTDINGIKLGSEIRKHDP
VGNIIFVTSHSELTYLTFVYKVAAMDFIFKDDPAELRTRIIDCLETAHTRLQLLSKDNSVETIELKRGSNSVYVQYDDIM
FFESSTKSHRLIAHLDNRQIEFYGNLKELSQLDDRFFRCHNSFVVNRHNIESIDSKERIVYFKNKEHCYASVRNVKKI

Nucleotide


Download         Length: 717 bp        

>NTDB_id=201935 FORC61_RS10425 WP_000688492.1 2022470..2023186(+) (agrA) [Staphylococcus aureus strain FORC_061]
ATGAAAATTTTCATTTGCGAAGACGATCCAAAACAAAGAGAAAACATGGTTACCATTATTAAAAATTATATAATGATAGA
AGAAAAGCCTATGGAAATTGCCCTCGCAACTGATAATCCTTATGAGGTGCTTGAGCAAGCTAAAAATATGAATGACATAG
GCTGTTACTTTTTAGATATTCAACTTTCAACTGATATTAATGGTATCAAATTAGGCAGTGAAATTCGTAAGCATGACCCA
GTTGGTAACATTATTTTCGTTACGAGTCACAGCGAACTTACCTATTTAACATTTGTCTACAAAGTTGCAGCGATGGATTT
TATTTTTAAAGATGATCCAGCAGAATTAAGAACTCGAATTATAGATTGTTTAGAAACTGCACATACACGCTTACAATTGT
TGTCTAAAGATAATAGCGTTGAAACGATTGAATTAAAACGTGGCAGTAATTCAGTGTATGTTCAATATGATGATATTATG
TTTTTTGAATCATCAACAAAATCTCACAGACTCATTGCCCATTTAGATAACCGTCAAATTGAATTTTATGGTAATTTAAA
AGAACTGAGTCAATTAGATGATCGTTTCTTTAGATGTCATAATAGCTTTGTCGTCAATCGCCATAATATTGAATCTATAG
ATTCGAAAGAGCGAATTGTCTATTTTAAAAATAAAGAACACTGCTATGCATCGGTGAGAAACGTTAAAAAAATATAA

Domains

Predicted by InterProScan.

Response regulator receiver domain (Response_reg)

(3-120)

LytTr DNA-binding domain (LytTR)

(151-237)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  PDB 3BS1
  PDB 4G4K

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  agrA Staphylococcus aureus N315

100

100

1