Detailed information NTG0020185

Bioinformatically predicted

Overview

• Name: HI0659
• Type: Machinery gene
• Locus tag: SPG_0533
• Genome accession: CP001015
• Coordinates: 515110..515376 (+)
• Length: 88 a.a.
• NCBI ID: ACF56314.1
• Uniprot ID: -
• Organism: Streptococcus pneumoniae G54
• Function: DNA uptake (predicted from homology) DNA binding and uptake

Related MGE

Note: This gene co-localizes with putative mobile genetic elements (MGEs) in the genome predicted by VRprofile2, as detailed below.

Gene-MGE association summary

MGE type	MGE coordinates	Gene coordinates	Relative position	Distance (bp)
IS/Tn	514582..514806	515110..515376	flank	304

Gene organization within MGE regions

Location: 514582..515376

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
SPG_0531	-	514582..514806 (+)	225	ACF56533.1	IS1239, transposase	-
SPG_0532	-	514869..514988 (+)	120	ACF55851.1	transposase, putative	-
SPG_0533	HI0659	515110..515376 (+)	267	ACF56314.1	conserved hypothetical protein	Machinery gene

Sequence

Protein

• Length: 88 a.a.
• Molecular weight: 9622.15 Da
• Isoelectric Point: 4.4893

>NTDB_id=20185 SPG_0533 ACF56314.1 515110..515376(+) (HI0659) [Streptococcus pneumoniae G54]
MEGCPSELFSKEEILESDMRVAIMSELIEARYEQGISQKKLEEVSGISQPVIARMETGKTSPQLDTVLKVLASLGKTLAI
VPLEQGKS

Nucleotide

• Length: 267 bp

>NTDB_id=20185 SPG_0533 ACF56314.1 515110..515376(+) (HI0659) [Streptococcus pneumoniae G54]
TTGGAAGGATGTCCATCTGAGCTCTTTAGCAAGGAGGAAATCCTTGAAAGTGATATGCGAGTGGCTATCATGAGCGAGTT
GATTGAGGCTAGGTATGAACAAGGAATCAGTCAGAAAAAGCTGGAAGAAGTCAGTGGAATAAGCCAGCCTGTCATAGCTA
GGATGGAGACAGGAAAGACTAGTCCTCAGTTGGATACAGTCTTAAAAGTCCTAGCCAGTTTAGGAAAGACACTAGCAATC
GTCCCACTTGAACAGGGAAAAAGTTGA

Domains

Predicted by InterproScan.

• Helix-turn-helix (HTH_3) (29-79)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
HI0659	Haemophilus influenzae Rd KW20	61.039	87.5	0.534