Detailed information    

insolico Bioinformatically predicted

Overview


Name   cinA   Type   Machinery gene
Locus tag   FORC62_RS07200 Genome accession   NZ_CP022582
Coordinates   1382201..1383352 (+) Length   383 a.a.
NCBI ID   WP_063456466.1    Uniprot ID   -
Organism   Staphylococcus aureus strain FORC_062     
Function   unknown (predicted from homology)   
Unclear

Genomic Context


Location: 1377201..1388352
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  FORC62_RS07175 (FORC62_1307) - 1378032..1379318 (+) 1287 WP_000664775.1 pitrilysin family protein -
  FORC62_RS07180 (FORC62_1308) - 1379318..1380022 (+) 705 WP_000646228.1 SDR family NAD(P)-dependent oxidoreductase -
  FORC62_RS07185 (FORC62_1309) - 1380127..1380954 (+) 828 WP_000214890.1 YmfK family protein -
  FORC62_RS07190 (FORC62_1310) - 1380973..1381365 (+) 393 WP_000859443.1 RodZ family helix-turn-helix domain-containing protein -
  FORC62_RS07195 (FORC62_1311) pgsA 1381399..1381977 (+) 579 WP_001025093.1 CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase -
  FORC62_RS07200 (FORC62_1312) cinA 1382201..1383352 (+) 1152 WP_063456466.1 CinA family nicotinamide mononucleotide deamidase-related protein Machinery gene
  FORC62_RS07205 (FORC62_1313) recA 1383517..1384560 (+) 1044 WP_000368166.1 recombinase RecA Machinery gene
  FORC62_RS07210 (FORC62_1315) rny 1384914..1386472 (+) 1559 Protein_1359 ribonuclease Y -
  FORC62_RS07215 (FORC62_1316) - 1386769..1386984 (-) 216 WP_000026308.1 hypothetical protein -
  FORC62_RS07220 (FORC62_1317) - 1387158..1387955 (+) 798 WP_001222105.1 TIGR00282 family metallophosphoesterase -

Sequence


Protein


Download         Length: 383 a.a.        Molecular weight: 43299.60 Da        Isoelectric Point: 6.1914

>NTDB_id=201807 FORC62_RS07200 WP_063456466.1 1382201..1383352(+) (cinA) [Staphylococcus aureus strain FORC_062]
MSIAIIAVGSELLLGQIANTNGQFLSKVFNEIGQNVLEHKVIGDNKKRLESSVRHALEKYDTVILTGGLGPTKDDLTKHT
VAQIVGKDLVIDEPSLKYIESYFEEQGQEMTPNNKQQALVIEGSTVLANHHGMAPGMMVNFENKQIILLPGPPKEMQPMV
KNELLSHFINHNRIIHSELLRFAGIGESKVETILIDLIDKQTNPTIAPLAGSHEVYIRLTANADSKEQAQSLIQPVKQEI
LDRIGEYYYGSDDTLIEQAVIKKIHEPFVIYDGITNGALYHRLKEVDLNDVLKGMINHNENFVDINKPIEQQLKDAVQFV
NKLFNVSSAIILLEYDGVVHIGYDNNFEFKTEQFKMSKSRNLLKNRSQNYVLIRLFNWLRTTN

Nucleotide


Download         Length: 1152 bp        

>NTDB_id=201807 FORC62_RS07200 WP_063456466.1 1382201..1383352(+) (cinA) [Staphylococcus aureus strain FORC_062]
ATGTCAATTGCCATTATTGCTGTAGGCTCAGAACTATTGCTAGGTCAAATCGCTAATACCAACGGACAATTTCTATCTAA
AGTATTTAATGAAATTGGACAAAATGTATTAGAACATAAAGTTATTGGAGATAATAAAAAACGTTTAGAATCAAGTGTAC
GTCATGCGTTAGAAAAATATGATACTGTTATTTTAACAGGTGGCTTAGGTCCTACGAAAGATGACTTAACGAAGCATACA
GTGGCCCAGATTGTTGGTAAAGATTTAGTTATTGATGAGCCTTCTTTAAAATATATTGAAAGCTATTTTGAGGAACAAGG
ACAAGAAATGACACCTAATAATAAACAACAGGCTTTAGTAATTGAAGGTTCAACTGTATTAGCAAATCATCATGGCATGG
CTCCAGGAATGATGGTGAATTTTGAAAACAAACAAATTATTTTATTACCAGGTCCACCGAAAGAAATGCAACCAATGGTG
AAAAATGAATTGTTGTCACATTTTATAAACCATAATCGAATTATACATTCTGAACTATTAAGATTTGCGGGAATAGGTGA
ATCTAAAGTAGAAACAATATTAATAGATCTTATCGATAAACAGACTAATCCTACGATTGCGCCTTTGGCGGGAAGTCATG
AAGTATATATTAGATTGACTGCAAATGCCGACTCAAAAGAACAAGCACAATCATTGATTCAACCTGTTAAACAAGAAATT
CTTGATCGTATTGGAGAATATTATTATGGTTCAGATGACACATTAATTGAGCAAGCTGTAATAAAGAAAATTCATGAACC
TTTTGTAATATATGATGGTATTACTAATGGTGCTTTATATCATCGATTGAAAGAAGTGGATTTAAACGATGTTCTAAAGG
GTATGATTAATCACAATGAAAACTTTGTTGATATTAATAAACCTATTGAGCAGCAATTAAAAGATGCAGTGCAATTTGTT
AATAAATTGTTTAATGTGTCATCAGCAATTATTCTATTAGAGTATGATGGTGTAGTCCATATAGGCTATGATAATAACTT
TGAATTTAAAACTGAGCAATTTAAAATGTCTAAATCTAGAAATTTATTAAAGAACAGAAGTCAAAATTATGTGCTCATAA
GATTATTTAATTGGCTTAGAACAACAAATTAA


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  cinA Bacillus subtilis subsp. subtilis str. 168

40.796

100

0.428


Multiple sequence alignment