Detailed information    

insolico Bioinformatically predicted

Overview

Name   pptA   Type   Regulator
Locus tag   Spy49_1345c Genome accession   CP000829
Coordinates   1349796..1350521 (-) Length   241 a.a.
NCBI ID   ACI61623.1    Uniprot ID   -
Organism   Streptococcus pyogenes NZ131     
Function   export ComS (predicted from homology)   
Competence regulation

Genomic Context

Location: 1344796..1355521
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  Spy49_1339c - 1344830..1345126 (-) 297 ACI61617.1 Predicted nucleic-acid-binding protein -
  Spy49_1340c nusA 1345142..1346299 (-) 1158 ACI61618.1 Transcription termination protein NusA -
  Spy49_1341c - 1346474..1347010 (-) 537 ACI61619.1 transcription termination protein NusA-like protein -
  Spy49_1342c - 1347269..1347904 (-) 636 ACI61620.1 tRNA(m7G46)-methyltransferase -
  Spy49_1343c - 1347904..1348695 (-) 792 ACI61621.1 Conserved hypothetical protein -
  Spy49_1344c - 1348759..1349793 (-) 1035 ACI61622.1 Putative ABC transporter -
  Spy49_1345c pptA 1349796..1350521 (-) 726 ACI61623.1 ABC transporter, ATP-binding protein Regulator
  Spy49_1346 hit 1350593..1351012 (+) 420 ACI61624.1 Putative cell-cycle regulation histidine triad (HIT) protein -
  Spy49_1347 - 1351009..1351365 (+) 357 ACI61625.1 Conserved hypothetical protein -
  Spy49_1348c - 1351476..1352759 (-) 1284 ACI61626.1 Putative transcription regulator -
  Spy49_1349c - 1352768..1353292 (-) 525 ACI61627.1 Histone acetyltransferase -
  Spy49_1350c - 1353267..1353728 (-) 462 ACI61628.1 Conserved hypothetical protein -
  Spy49_1351c - 1353882..1355342 (-) 1461 ACI61629.1 hypothetical protein -

Sequence

Protein


Download         Length: 241 a.a.        Molecular weight: 26678.75 Da        Isoelectric Point: 4.5624

>NTDB_id=20158 Spy49_1345c ACI61623.1 1349796..1350521(-) (pptA) [Streptococcus pyogenes NZ131]
MLNIKNLTGGYHNIPVLNDVSFSVDNGELVGLIGLNGAGKSTTINEIIGFLKPYQGSISIDGLTLAENAVAYRQKIGFIP
ETPSLYEELTLSEHINTVAMAYDIDLEVAQKRAQPFLEMFRLTDKLEWFPVNFSKGMKQKVMIICAFVIDPSLFILDEPF
LGLDPLAISDLIQTLEVEKAKGKSILMSTHVLDSAERMCDRFVILHHGQVRAQGTLADLQEAFGDRSASLNDIYLALTKE
D

Nucleotide


Download         Length: 726 bp        

>NTDB_id=20158 Spy49_1345c ACI61623.1 1349796..1350521(-) (pptA) [Streptococcus pyogenes NZ131]
ATGTTAAACATTAAAAATCTAACAGGAGGATATCACAATATCCCTGTTTTAAACGATGTCTCATTTTCTGTAGACAATGG
AGAGTTAGTCGGTTTGATCGGGCTAAATGGTGCTGGAAAGTCAACAACTATCAACGAAATTATTGGCTTTTTGAAGCCTT
ATCAAGGAAGTATTTCTATTGATGGTTTAACTCTAGCAGAAAATGCAGTTGCCTACCGTCAAAAAATAGGTTTTATCCCA
GAAACTCCTAGTCTCTATGAAGAATTGACCTTATCAGAGCATATCAACACCGTAGCTATGGCTTATGATATCGACTTAGA
AGTGGCACAAAAACGAGCACAACCTTTCTTGGAAATGTTTCGTTTAACTGACAAACTTGAATGGTTTCCTGTCAATTTTT
CTAAAGGGATGAAACAAAAAGTCATGATTATTTGTGCCTTTGTCATTGATCCAAGTCTATTTATTCTTGATGAACCATTC
TTAGGGTTAGACCCTTTAGCTATTTCAGACTTAATCCAAACGCTAGAAGTCGAAAAAGCAAAAGGAAAATCTATTTTGAT
GAGCACACATGTTTTGGACTCTGCTGAAAGAATGTGTGATCGTTTTGTGATTTTGCATCATGGACAAGTTCGTGCCCAAG
GAACTCTTGCTGACTTGCAAGAAGCTTTTGGTGACCGTTCAGCGAGCTTAAATGATATCTATCTTGCATTAACAAAAGAG
GATTAA

Domains

Predicted by InterproScan.

ABC transporter (ABC_tran)

(17-160)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  pptA Streptococcus salivarius strain HSISS4

72.803

99.17

0.722
  pptA Streptococcus thermophilus LMD-9

71.967

99.17

0.714

Multiple sequence alignment