Detailed information    

insolico Bioinformatically predicted

Overview

Name   rcrP   Type   Regulator
Locus tag   CGL27_RS26600 Genome accession   NZ_CP022545
Coordinates   6253997..6255739 (+) Length   580 a.a.
NCBI ID   WP_162953074.1    Uniprot ID   -
Organism   Streptomyces sp. 11-1-2     
Function   regulate competence (predicted from homology)   
Competence regulation

Genomic Context

Location: 6248997..6260739
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  CGL27_RS26570 (CGL27_26265) - 6249370..6249627 (-) 258 WP_014053929.1 DUF3099 domain-containing protein -
  CGL27_RS26575 (CGL27_26270) - 6249785..6250072 (-) 288 WP_028814639.1 DUF1416 domain-containing protein -
  CGL27_RS26580 (CGL27_26275) - 6250105..6250944 (-) 840 WP_078642749.1 sulfurtransferase -
  CGL27_RS26585 (CGL27_26280) - 6251390..6252076 (-) 687 WP_078642750.1 DUF2993 domain-containing protein -
  CGL27_RS26590 (CGL27_26285) - 6252159..6253588 (-) 1430 Protein_5257 hypothetical protein -
  CGL27_RS26595 (CGL27_26290) - 6253600..6253875 (-) 276 WP_203348498.1 MoaD/ThiS family protein -
  CGL27_RS26600 (CGL27_26295) rcrP 6253997..6255739 (+) 1743 WP_162953074.1 ABC transporter ATP-binding protein Regulator
  CGL27_RS26605 (CGL27_26300) rcrQ 6255855..6257813 (+) 1959 WP_107439114.1 ABC transporter ATP-binding protein Regulator
  CGL27_RS26610 (CGL27_26305) - 6257852..6258796 (-) 945 WP_240450643.1 alpha/beta fold hydrolase -
  CGL27_RS26615 (CGL27_26310) - 6259051..6259863 (+) 813 WP_119990489.1 response regulator transcription factor -

Sequence

Protein


Download         Length: 580 a.a.        Molecular weight: 62693.96 Da        Isoelectric Point: 6.8413

>NTDB_id=201527 CGL27_RS26600 WP_162953074.1 6253997..6255739(+) (rcrP) [Streptomyces sp. 11-1-2]
MLVRLIRAHLRPYTRTITLIVLLQLVQTLATLYLPALNADIIDGGVVKGDTGYIVRVGGLMIAVTFVQIVCAAGAVYFSA
RTSMALGRDVRAAVFDRVQSFSAREMGHFGAPSLITRTTNDVQQVQMLCLMAFTLMVSAPIMCVGGVVMALNQDVPLSGL
LLLIVPVLGVVVTFVVRRMRPLFRHVQERIDTVNRVLREQITGIRVIRAFVRDTHERDRFTAANTGLMDVSLRAGRLMSL
MFPAVMLVVNVSSVAVVWFGGHRIDSGGMQIGALTAFLSYLAQILSSVMMATFMFMMVPRAEVCAERVQEVLDTETSVVP
PLVPVTAAPADAGRGLLELRGVEFRFPGADEPVLRDISLIARPGRTTAVIGSTGSGKSTLLGLVPRLFDATDGSVHLDGV
DVRDLDPEVMTRNIGLVPQKPYLFAGTVASNLRYGNPDATDAELWRALETAQAREFVESMEAGLDAPIAQGGTNVSGGQR
QRLAIARALVRRPSVYLFDDSFSALDYATDARLRAALVDETENSTVVIVAQRVSTIRGADLIVVLDAGRIVGAGTHGELM
AGNETYREIVLSQLTEQEAA

Nucleotide


Download         Length: 1743 bp        

>NTDB_id=201527 CGL27_RS26600 WP_162953074.1 6253997..6255739(+) (rcrP) [Streptomyces sp. 11-1-2]
GTGCTGGTACGACTGATACGGGCGCATCTGAGGCCCTATACCCGAACGATCACGCTGATCGTCTTATTGCAGCTGGTGCA
GACCCTCGCCACCCTCTACCTCCCCGCGCTGAACGCGGACATCATCGACGGCGGAGTGGTGAAGGGCGACACCGGCTACA
TCGTCCGTGTCGGCGGGCTGATGATCGCCGTCACGTTTGTTCAGATCGTGTGCGCCGCGGGAGCCGTCTACTTCAGCGCC
CGTACGTCCATGGCGCTCGGCCGCGATGTGCGCGCCGCCGTCTTCGACCGGGTGCAGTCCTTCTCCGCCCGTGAGATGGG
CCACTTCGGGGCGCCGTCCCTGATCACCCGCACCACCAACGATGTGCAGCAGGTGCAGATGCTGTGCCTGATGGCGTTCA
CGCTGATGGTCTCGGCGCCGATCATGTGCGTCGGCGGTGTGGTCATGGCGCTCAACCAGGACGTTCCGCTGTCGGGGCTG
CTCCTGCTCATCGTTCCGGTCCTGGGCGTGGTCGTCACGTTCGTCGTCCGCCGGATGCGCCCGCTGTTCCGCCATGTCCA
GGAGCGCATCGACACCGTCAACCGGGTGCTGCGCGAGCAGATCACCGGTATCCGGGTCATCCGCGCCTTCGTCCGCGACA
CCCATGAGCGCGACCGCTTCACCGCCGCCAACACCGGGCTGATGGACGTCTCACTGCGGGCCGGACGGCTGATGTCGCTG
ATGTTCCCCGCCGTGATGCTGGTGGTGAACGTCTCCAGCGTGGCCGTCGTCTGGTTCGGCGGGCACCGGATCGACAGCGG
CGGGATGCAGATCGGCGCGCTGACCGCGTTCCTCAGCTATCTGGCGCAGATTCTGTCGTCCGTGATGATGGCCACCTTCA
TGTTCATGATGGTGCCGAGGGCCGAGGTGTGCGCCGAGCGCGTACAGGAGGTGCTGGACACCGAGACCAGCGTCGTACCG
CCCCTCGTGCCCGTCACGGCCGCGCCCGCCGACGCCGGACGAGGGCTGCTGGAGCTGCGGGGCGTGGAGTTCCGCTTCCC
CGGCGCCGACGAGCCGGTGCTGCGCGACATCTCGCTGATCGCCCGGCCCGGCCGGACCACCGCCGTCATCGGCTCCACCG
GCAGTGGCAAGTCGACCCTGCTCGGGTTGGTGCCACGGCTGTTCGACGCGACCGACGGCAGCGTCCACCTCGACGGGGTG
GATGTGCGCGACCTCGACCCGGAGGTGATGACCCGGAACATCGGGCTCGTTCCGCAGAAGCCGTATCTCTTCGCCGGCAC
CGTCGCCTCGAACCTGCGGTACGGCAATCCCGACGCCACCGACGCAGAGCTGTGGCGGGCCCTGGAGACCGCCCAGGCGC
GGGAGTTCGTGGAGTCCATGGAGGCCGGGCTCGACGCCCCGATCGCCCAGGGCGGAACCAACGTGTCCGGCGGCCAGCGG
CAGCGGCTGGCCATCGCCCGGGCCCTGGTCCGCAGGCCGTCCGTCTATCTCTTCGACGACTCCTTCTCCGCGCTCGACTA
CGCCACCGACGCCCGGCTGAGGGCGGCGCTCGTGGACGAGACGGAGAACTCGACGGTCGTCATCGTGGCCCAGCGGGTGT
CCACCATCCGGGGCGCCGATCTGATCGTGGTGCTCGACGCGGGGCGGATCGTCGGCGCCGGTACCCACGGCGAGCTGATG
GCCGGCAACGAGACCTACCGCGAGATCGTGCTCTCCCAGCTCACCGAACAGGAGGCGGCATGA

Domains

Predicted by InterProScan.

ABC transporter transmembrane region (ABC_membrane)

(18-287)

ABC transporter (ABC_tran)

(354-501)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  rcrP Streptococcus mutans UA159

39.459

95.69

0.378

Multiple sequence alignment