Detailed information    

insolico Bioinformatically predicted

Overview

Name   recX   Type   Regulator
Locus tag   BKN48_RS14590 Genome accession   NZ_CP017676
Coordinates   2804334..2805128 (+) Length   264 a.a.
NCBI ID   WP_070548729.1    Uniprot ID   -
Organism   Bacillus subtilis strain VV2     
Function   inhibit excessive RecA-mediated recombination (predicted from homology)   
Competence regulation

Genomic Context

Location: 2799334..2810128
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  BKN48_RS14560 (BKN48_14560) sxzA 2800172..2801203 (+) 1032 WP_070548725.1 FecCD family ABC transporter permease -
  BKN48_RS14565 (BKN48_14565) yfhB 2801318..2802199 (+) 882 WP_070548726.1 PhzF family phenazine biosynthesis isomerase -
  BKN48_RS14570 (BKN48_14570) yfhC 2802287..2802871 (+) 585 WP_070548727.1 nitroreductase family protein -
  BKN48_RS14575 (BKN48_14575) yfhD 2802910..2803101 (-) 192 WP_003233561.1 YfhD family protein -
  BKN48_RS14580 (BKN48_14580) yfhE 2803169..2803279 (-) 111 WP_003223230.1 YfhE family protein -
  BKN48_RS14585 (BKN48_14585) yfhF 2803334..2804245 (-) 912 WP_070548728.1 TIGR01777 family oxidoreductase -
  BKN48_RS14590 (BKN48_14590) recX 2804334..2805128 (+) 795 WP_070548729.1 recombination regulator RecX Regulator
  BKN48_RS14595 (BKN48_14595) yfhH 2805130..2805444 (+) 315 WP_003244592.1 YfhH family protein -
  BKN48_RS14605 (BKN48_14605) yfhI 2805587..2806780 (+) 1194 WP_072692836.1 MFS transporter -
  BKN48_RS14610 (BKN48_14610) sspK 2806812..2806964 (-) 153 WP_003223241.1 small, acid-soluble spore protein K -
  BKN48_RS14615 (BKN48_14615) yfhJ 2807089..2807358 (+) 270 WP_003243789.1 YfhJ family protein -
  BKN48_RS14620 (BKN48_14620) yfhK 2807503..2808021 (+) 519 WP_049140591.1 SH3 domain-containing protein -
  BKN48_RS14625 (BKN48_14625) spdL 2808106..2808438 (+) 333 WP_049140590.1 SdpC immunity protein SpdL -
  BKN48_RS14630 (BKN48_14630) ephM 2808425..2809285 (+) 861 WP_070548730.1 epoxide hydrolase EphM -

Sequence

Protein


Download         Length: 264 a.a.        Molecular weight: 31063.25 Da        Isoelectric Point: 6.6685

>NTDB_id=201510 BKN48_RS14590 WP_070548729.1 2804334..2805128(+) (recX) [Bacillus subtilis strain VV2]
MPFITKISTQKKNTERFNIFLDDKYAFSVDADVLVKFELKKGKELDDLDIIEIQYGDEVKKGFNRALDFLSYRMRSTKEV
EDHLKKKETSPPVIAEVIHRLNDYKYLNDQEFAAAYVSTHKKTNGKGPDVLFRELRAKGIDDDTIKEALSSYSFEDQTRE
AVKHVEKLLKKDKKLSTKEFKQRAQLQLQRKGFSFDVISAAMDQIEYENDEDTEKEALRLHAEKAFRKYRYDGSYESAMK
VKQFLFRKGFSLDLIEQLLQEEEY

Nucleotide


Download         Length: 795 bp        

>NTDB_id=201510 BKN48_RS14590 WP_070548729.1 2804334..2805128(+) (recX) [Bacillus subtilis strain VV2]
ATGCCGTTTATTACAAAAATATCAACGCAAAAAAAGAATACGGAACGCTTCAATATTTTTCTGGATGATAAATACGCCTT
CAGTGTGGACGCGGATGTGCTCGTGAAATTTGAGCTCAAGAAGGGAAAAGAACTCGATGATCTTGACATCATTGAGATTC
AATACGGCGATGAAGTGAAGAAAGGCTTCAACCGTGCGCTTGACTTTTTATCCTATCGAATGCGGTCGACGAAAGAGGTC
GAGGACCACTTAAAGAAAAAAGAAACCTCGCCCCCCGTCATTGCGGAAGTCATCCATAGGCTTAACGATTACAAGTACTT
AAACGACCAGGAATTTGCCGCAGCCTATGTCAGCACTCACAAAAAAACAAACGGAAAAGGCCCTGATGTTTTGTTCAGAG
AGCTAAGAGCGAAGGGAATTGATGACGATACAATTAAGGAGGCGCTAAGTTCCTATTCCTTTGAAGATCAGACAAGAGAA
GCGGTCAAGCATGTTGAAAAGCTTCTCAAAAAAGATAAAAAGCTTTCGACGAAAGAATTCAAACAGCGCGCCCAGCTGCA
GCTTCAGCGCAAGGGCTTCTCATTTGATGTTATCAGCGCGGCGATGGATCAGATTGAATATGAAAATGATGAAGACACGG
AGAAAGAAGCGCTGCGCCTTCACGCGGAAAAAGCATTTAGAAAATACCGCTATGACGGCTCATATGAAAGCGCCATGAAG
GTCAAACAATTTTTATTCCGCAAAGGATTCTCACTCGATTTAATCGAGCAATTACTGCAGGAAGAGGAGTACTGA

Domains

Predicted by InterproScan.

RecX family (RecX_HTH2)

(84-206)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  recX Bacillus subtilis subsp. subtilis str. 168

99.242

100

0.992

Multiple sequence alignment