Detailed information
Bioinformatically predicted
Overview
| Name | abrB | Type | Regulator |
| Locus tag | BKN48_RS10295 | Genome accession | NZ_CP017676 |
| Coordinates | 1952817..1953107 (-) | Length | 96 a.a. |
| NCBI ID | WP_003226760.1 | Uniprot ID | A0A7G9PCZ4 |
| Organism | Bacillus subtilis strain VV2 | ||
| Function | repression of comK; repression of rok (predicted from homology) Competence regulation |
||
Genomic Context
Location: 1947817..1958107
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| BKN48_RS10255 (BKN48_10255) | darA | 1947840..1948169 (+) | 330 | WP_003242755.1 | cyclic di-AMP receptor DarA | - |
| BKN48_RS10260 (BKN48_10260) | yaaR | 1948182..1948622 (+) | 441 | WP_009966249.1 | YaaR family protein | - |
| BKN48_RS10265 (BKN48_10265) | holB | 1948634..1949623 (+) | 990 | WP_003226770.1 | DNA polymerase III subunit delta' | - |
| BKN48_RS10270 (BKN48_10270) | ricT | 1949626..1950453 (+) | 828 | WP_003226767.1 | competence/sporulation regulator complex protein RicT | - |
| BKN48_RS10275 (BKN48_10275) | yabA | 1950468..1950827 (+) | 360 | WP_003218308.1 | replication initiation-control protein YabA | - |
| BKN48_RS10280 (BKN48_10280) | trmNF | 1950886..1951629 (+) | 744 | WP_070548342.1 | tRNA1(Val) (adenine(37)-N6)-methyltransferase | - |
| BKN48_RS10285 (BKN48_10285) | yazA | 1951616..1951915 (+) | 300 | WP_003242983.1 | GIY-YIG nuclease family protein | - |
| BKN48_RS10290 (BKN48_10290) | rsmI | 1951890..1952768 (+) | 879 | WP_070548344.1 | 16S rRNA (cytidine(1402)-2'-O)-methyltransferase | - |
| BKN48_RS10295 (BKN48_10295) | abrB | 1952817..1953107 (-) | 291 | WP_003226760.1 | transition state genes transcriptional regulator AbrB | Regulator |
| BKN48_RS10300 (BKN48_10300) | metG | 1953601..1955595 (+) | 1995 | WP_021479730.1 | methionine--tRNA ligase | - |
| BKN48_RS10305 (BKN48_10305) | dayD | 1955675..1956442 (+) | 768 | WP_070548346.1 | TatD family hydrolase | - |
| BKN48_RS10310 (BKN48_10310) | yabE | 1956598..1957911 (+) | 1314 | WP_015715099.1 | ubiquitin-like domain-containing protein | - |
Sequence
Protein
Download Length: 96 a.a. Molecular weight: 10772.62 Da Isoelectric Point: 6.3482
>NTDB_id=201500 BKN48_RS10295 WP_003226760.1 1952817..1953107(-) (abrB) [Bacillus subtilis strain VV2]
MFMKSTGIVRKVDELGRVVIPIELRRTLGIAEKDALEIYVDDEKIILKKYKPNMTCQVTGEVSDDNLKLAGGKLVLSKEG
AEQIISEIQNQLQNLK
MFMKSTGIVRKVDELGRVVIPIELRRTLGIAEKDALEIYVDDEKIILKKYKPNMTCQVTGEVSDDNLKLAGGKLVLSKEG
AEQIISEIQNQLQNLK
Nucleotide
Download Length: 291 bp
>NTDB_id=201500 BKN48_RS10295 WP_003226760.1 1952817..1953107(-) (abrB) [Bacillus subtilis strain VV2]
ATGTTTATGAAATCTACTGGTATTGTACGTAAAGTTGATGAATTAGGACGTGTAGTTATTCCTATCGAACTGCGTCGTAC
TCTTGGAATCGCAGAAAAAGATGCTCTTGAAATCTATGTTGATGATGAAAAAATCATCCTTAAAAAATATAAACCAAACA
TGACTTGCCAAGTAACTGGTGAAGTTTCTGATGATAACCTTAAACTTGCAGGCGGTAAATTGGTTCTTAGTAAAGAAGGC
GCTGAGCAAATCATCAGCGAAATCCAAAACCAGCTTCAAAACCTTAAATAA
ATGTTTATGAAATCTACTGGTATTGTACGTAAAGTTGATGAATTAGGACGTGTAGTTATTCCTATCGAACTGCGTCGTAC
TCTTGGAATCGCAGAAAAAGATGCTCTTGAAATCTATGTTGATGATGAAAAAATCATCCTTAAAAAATATAAACCAAACA
TGACTTGCCAAGTAACTGGTGAAGTTTCTGATGATAACCTTAAACTTGCAGGCGGTAAATTGGTTCTTAGTAAAGAAGGC
GCTGAGCAAATCATCAGCGAAATCCAAAACCAGCTTCAAAACCTTAAATAA
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| abrB | Bacillus subtilis subsp. subtilis str. 168 |
100 |
100 |
1 |