Detailed information    

insolico Bioinformatically predicted

Overview

Name   vicX   Type   Regulator
Locus tag   Spy49_0446 Genome accession   CP000829
Coordinates   443229..444038 (+) Length   269 a.a.
NCBI ID   ACI60778.1    Uniprot ID   -
Organism   Streptococcus pyogenes NZ131     
Function   require for competence development (predicted from homology)   
Competence regulation

Genomic Context

Location: 438229..449038
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  Spy49_0441 - 438671..439918 (+) 1248 ACI60774.1 Long-chain-fatty-acid--CoA ligase -
  Spy49_0442 - 439974..441008 (+) 1035 ACI60775.1 hypothetical protein -
  Spy49_0444 vicR 441170..441880 (+) 711 ACI60776.1 Two-component response regulator Regulator
  Spy49_0445 vicK 441873..443225 (+) 1353 ACI60777.1 Two-component sensor histidine kinase Regulator
  Spy49_0446 vicX 443229..444038 (+) 810 ACI60778.1 Zn-dependent hydrolase (beta-lactamase superfamily) Regulator
  Spy49_0447 acpA 444483..445175 (+) 693 ACI60779.1 Ribonuclease III -
  Spy49_0448 smc 445176..448715 (+) 3540 ACI60780.1 Putative chromosome segregation SMC -

Sequence

Protein


Download         Length: 269 a.a.        Molecular weight: 30095.20 Da        Isoelectric Point: 5.5314

>NTDB_id=20142 Spy49_0446 ACI60778.1 443229..444038(+) (vicX) [Streptococcus pyogenes NZ131]
MNESGFKYSILASGSTGNCFYLETPKKRLLIDAGLTGKKITSLLAEIDRKPEDLDAILITHEHSDHIKGVGVMARKYHLD
IYANEKTWQLMDECNMLGKLDASQKHIFQRDKVLTFGDVDIESFGVSHDAIDPQFYRIMKDNKSFVMLTDTGYVSDRMTG
IIENADGYLIESNHDIEILRSGSYPWSLKQRILSDLGHLSNEDGAGAMIRSLGYNTKKIYLGHLSKENNIKELAHMTMVN
QLAMADLAVGTDFTVHDTSPDTACPLTDI

Nucleotide


Download         Length: 810 bp        

>NTDB_id=20142 Spy49_0446 ACI60778.1 443229..444038(+) (vicX) [Streptococcus pyogenes NZ131]
ATGAATGAGAGTGGTTTTAAATATAGTATTTTAGCATCTGGGTCCACAGGAAATTGTTTTTATTTAGAAACACCTAAAAA
ACGCTTATTGATTGATGCAGGGCTTACTGGTAAGAAAATTACCAGTCTTCTTGCTGAAATTGACCGCAAACCTGAGGATT
TGGATGCTATTTTGATTACCCATGAGCACTCTGACCATATTAAGGGTGTAGGCGTTATGGCCCGCAAATACCATTTGGAT
ATCTATGCTAATGAAAAAACATGGCAGCTGATGGATGAGTGCAATATGCTAGGTAAGCTTGATGCCTCACAAAAACATAT
TTTCCAAAGGGATAAAGTTTTGACCTTTGGAGATGTTGATATCGAAAGTTTTGGAGTCAGCCATGACGCTATTGATCCTC
AATTTTATCGGATTATGAAAGATAATAAGTCTTTTGTGATGTTGACAGATACAGGATATGTCAGTGATAGGATGACAGGT
ATTATTGAAAATGCAGATGGCTACTTGATTGAATCCAATCATGATATTGAAATTTTGAGATCAGGCTCTTATCCTTGGAG
CTTGAAGCAGCGTATTTTATCTGATTTAGGACATTTATCAAATGAAGATGGAGCGGGAGCCATGATTAGAAGCCTGGGGT
ACAATACCAAAAAAATATACCTAGGTCATCTGAGTAAAGAAAATAACATCAAAGAGTTAGCGCATATGACGATGGTCAAT
CAACTGGCTATGGCAGATTTAGCAGTAGGTACAGACTTTACGGTCCATGATACCTCTCCAGATACTGCTTGTCCATTAAC
TGATATTTGA

Domains

Predicted by InterproScan.

Metallo-beta-lactamase superfamily (Lactamase_B)

(15-223)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  vicX Streptococcus mutans UA159

75.836

100

0.758

Multiple sequence alignment