Detailed information    

insolico Bioinformatically predicted

Overview

Name   spo0J   Type   Regulator
Locus tag   BKM67_RS10850 Genome accession   NZ_CP017667
Coordinates   2227123..2227887 (+) Length   254 a.a.
NCBI ID   WP_044693492.1    Uniprot ID   -
Organism   Streptococcus suis strain 1081     
Function   require for competence development (predicted from homology)   
Competence regulation

Genomic Context

Location: 2222123..2232887
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  BKM67_RS10810 (BKM67_10555) - 2222478..2222816 (+) 339 WP_105183998.1 DUF771 domain-containing protein -
  BKM67_RS10815 (BKM67_10560) - 2222879..2224000 (+) 1122 WP_105183999.1 site-specific integrase -
  BKM67_RS10835 (BKM67_10580) - 2224505..2225188 (-) 684 WP_105184000.1 YoaK family protein -
  BKM67_RS10840 (BKM67_10585) rlmH 2225213..2225692 (-) 480 WP_105184001.1 23S rRNA (pseudouridine(1915)-N(3))-methyltransferase RlmH -
  BKM67_RS10845 (BKM67_10590) htrA 2225866..2227062 (+) 1197 WP_044668907.1 trypsin-like peptidase domain-containing protein Regulator
  BKM67_RS10850 (BKM67_10595) spo0J 2227123..2227887 (+) 765 WP_044693492.1 ParB/RepB/Spo0J family partition protein Regulator

Sequence

Protein


Download         Length: 254 a.a.        Molecular weight: 28996.30 Da        Isoelectric Point: 9.1678

>NTDB_id=201381 BKM67_RS10850 WP_044693492.1 2227123..2227887(+) (spo0J) [Streptococcus suis strain 1081]
MEELRTLNISEIHPNPYQPRIHFDEKELLELAQSIKENGLIQPIIVRKSSIIGYELLAGERRLRASQLAGLTTIPAVVKE
LTDDDLLYQAIIENLQRSNLNPIEEAASYQKLISRGLTHDEVAQIMGKSRPYISNLLRLLNLSSQTKQAVEEGQISQGHA
RQLVSFSEEKQAEWVQLILSKDLSVRMLEKLIAANKKKHTKLKQRDQFLKEQEDSLSKTLGTATKIIKKKNGSGEIRISF
NDLDEFERIINNFK

Nucleotide


Download         Length: 765 bp        

>NTDB_id=201381 BKM67_RS10850 WP_044693492.1 2227123..2227887(+) (spo0J) [Streptococcus suis strain 1081]
ATGGAAGAATTACGTACACTAAATATTTCAGAAATCCATCCCAATCCCTATCAGCCAAGAATTCATTTTGATGAAAAGGA
GCTACTTGAGCTCGCTCAATCCATTAAGGAAAATGGATTAATTCAACCGATTATTGTAAGAAAATCTTCTATTATCGGAT
ACGAATTATTAGCTGGAGAAAGAAGGTTGCGAGCCAGTCAATTAGCCGGACTGACTACAATACCAGCAGTGGTAAAAGAA
CTGACTGATGATGATTTACTCTATCAGGCTATCATAGAGAATCTGCAGCGTTCTAACTTAAATCCGATAGAAGAAGCAGC
CTCTTATCAAAAATTGATTAGTAGAGGGTTAACGCATGATGAAGTTGCTCAAATCATGGGAAAATCAAGACCATATATCA
GTAATTTATTGCGCCTACTAAATCTATCATCTCAGACTAAACAAGCTGTAGAAGAAGGACAAATTTCACAAGGGCACGCG
CGACAATTGGTGTCATTTTCAGAAGAAAAGCAAGCCGAATGGGTTCAACTCATTTTATCAAAGGATTTAAGTGTGCGTAT
GCTTGAAAAATTAATAGCTGCAAATAAGAAAAAACACACTAAGCTTAAACAACGCGACCAATTTTTAAAAGAACAGGAAG
ATTCACTCAGTAAAACTCTTGGAACAGCTACAAAAATTATCAAGAAGAAAAACGGGAGCGGAGAAATTCGGATTAGCTTT
AATGATCTCGATGAATTCGAAAGAATTATCAACAATTTTAAATAG

Domains

Predicted by InterproScan.

HTH domain found in ParB protein (HTH_ParB)

(146-193)

ParB/Sulfiredoxin domain (ParB_N)

(7-94)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  spo0J Streptococcus mutans UA159

55.159

99.213

0.547

Multiple sequence alignment