Detailed information    

insolico Bioinformatically predicted

Overview

Name   pptA   Type   Regulator
Locus tag   BKM67_RS09035 Genome accession   NZ_CP017667
Coordinates   1835597..1836331 (-) Length   244 a.a.
NCBI ID   WP_105183873.1    Uniprot ID   A0AAD0L1A4
Organism   Streptococcus suis strain 1081     
Function   export ComS (predicted from homology)   
Competence regulation

Genomic Context

Location: 1830597..1841331
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  BKM67_RS09005 (BKM67_08825) - 1830785..1831081 (-) 297 WP_002942375.1 YlxR family protein -
  BKM67_RS09010 (BKM67_08830) nusA 1831098..1832240 (-) 1143 WP_014638606.1 transcription termination factor NusA -
  BKM67_RS09015 (BKM67_08835) rimP 1832313..1832783 (-) 471 WP_002942369.1 ribosome maturation factor RimP -
  BKM67_RS09020 (BKM67_08840) trmB 1833081..1833719 (-) 639 WP_002939002.1 tRNA (guanosine(46)-N7)-methyltransferase TrmB -
  BKM67_RS09025 (BKM67_08845) - 1833716..1834510 (-) 795 WP_029188407.1 phosphotransferase family protein -
  BKM67_RS09030 (BKM67_08850) - 1834560..1835600 (-) 1041 WP_105183872.1 ABC transporter permease -
  BKM67_RS09035 (BKM67_08855) pptA 1835597..1836331 (-) 735 WP_105183873.1 ABC transporter ATP-binding protein Regulator
  BKM67_RS09040 (BKM67_08860) - 1836394..1836807 (+) 414 WP_014638608.1 HIT family protein -
  BKM67_RS09045 (BKM67_08865) - 1836809..1837111 (+) 303 WP_024383569.1 hypothetical protein -
  BKM67_RS09050 (BKM67_08870) - 1837581..1838774 (-) 1194 WP_024379502.1 LCP family protein -
  BKM67_RS09055 (BKM67_08875) - 1838771..1839298 (-) 528 WP_105183874.1 GNAT family N-acetyltransferase -
  BKM67_RS09060 (BKM67_08880) tsaE 1839291..1839731 (-) 441 WP_024376437.1 tRNA (adenosine(37)-N6)-threonylcarbamoyltransferase complex ATPase subunit type 1 TsaE -

Sequence

Protein


Download         Length: 244 a.a.        Molecular weight: 26846.13 Da        Isoelectric Point: 4.3661

>NTDB_id=201374 BKM67_RS09035 WP_105183873.1 1835597..1836331(-) (pptA) [Streptococcus suis strain 1081]
MLEVKNVTGGYVNIPVLKDVSFTVEDGQLVGLIGLNGAGKSTTIKEIIGLLTPYQGQIAIDGLTLLQGAENYRKKIGFIP
ETPSLYEELTLKEHLEVVAMAYDLSWEQAWGRVEHLLKLFRLDEKLDWFPVNFSKGMKQKVMIICAFMVEPSLLIVDEPF
LGLDPVAISDLIALLEEEKSKGTSILMSTHVLESAEKMCDSFVILHQGQVRATGNLEELQSAFGMDGASLNEIYLALTQE
GVAG

Nucleotide


Download         Length: 735 bp        

>NTDB_id=201374 BKM67_RS09035 WP_105183873.1 1835597..1836331(-) (pptA) [Streptococcus suis strain 1081]
ATGTTAGAAGTAAAAAATGTAACTGGAGGATATGTCAATATCCCGGTTTTGAAAGATGTATCTTTTACGGTTGAGGATGG
TCAATTAGTTGGTCTAATTGGTTTAAATGGTGCAGGGAAATCAACGACTATTAAGGAAATTATCGGTCTTTTGACACCTT
ATCAAGGACAGATTGCAATTGACGGCCTAACTTTGCTACAAGGGGCTGAAAATTATCGGAAGAAGATTGGTTTTATCCCT
GAAACACCAAGTTTGTATGAAGAACTAACCCTCAAAGAGCACTTGGAAGTGGTAGCAATGGCCTATGATTTATCCTGGGA
GCAAGCTTGGGGACGTGTTGAGCACTTGTTAAAACTATTTCGCTTGGATGAAAAATTGGACTGGTTTCCTGTCAATTTTT
CAAAGGGAATGAAGCAGAAGGTCATGATTATTTGTGCTTTTATGGTGGAGCCGAGTCTGCTGATTGTTGATGAGCCTTTT
CTGGGATTAGACCCTGTGGCTATCTCTGACTTGATCGCTCTTTTGGAGGAAGAAAAATCTAAGGGCACTTCCATTCTCAT
GTCCACTCACGTTCTTGAATCAGCTGAGAAAATGTGCGACTCTTTTGTGATTTTACATCAGGGACAGGTCCGTGCAACTG
GAAATTTGGAGGAGCTACAAAGCGCATTTGGTATGGATGGTGCAAGTCTGAACGAAATTTATCTGGCCTTGACGCAAGAA
GGAGTGGCTGGATGA

Domains

Predicted by InterproScan.

ABC transporter (ABC_tran)

(17-160)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  pptA Streptococcus salivarius strain HSISS4

74.895

97.951

0.734
  pptA Streptococcus thermophilus LMD-9

73.222

97.951

0.717

Multiple sequence alignment