Detailed information    

insolico Bioinformatically predicted

Overview

Name   treR   Type   Regulator
Locus tag   BKM67_RS01195 Genome accession   NZ_CP017667
Coordinates   218129..218842 (+) Length   237 a.a.
NCBI ID   WP_024406828.1    Uniprot ID   A0A2Z4PGS2
Organism   Streptococcus suis strain 1081     
Function   regulate expression of competence genes (predicted from homology)   
Competence regulation

Genomic Context

Location: 213129..223842
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  BKM67_RS01185 (BKM67_01170) treC 213887..215512 (-) 1626 WP_105184015.1 alpha,alpha-phosphotrehalase -
  BKM67_RS01190 (BKM67_01180) treP 215907..217895 (-) 1989 WP_105184014.1 PTS system trehalose-specific EIIBC component -
  BKM67_RS01195 (BKM67_01185) treR 218129..218842 (+) 714 WP_024406828.1 trehalose operon repressor Regulator
  BKM67_RS01200 (BKM67_01190) - 218900..219211 (+) 312 WP_002935948.1 hypothetical protein -
  BKM67_RS01205 (BKM67_01195) - 219208..219756 (+) 549 WP_002935945.1 CvpA family protein -
  BKM67_RS01210 (BKM67_01200) - 220097..222430 (+) 2334 WP_105184013.1 endonuclease MutS2 -
  BKM67_RS01215 (BKM67_01205) - 222454..223107 (+) 654 WP_074391367.1 GNAT family N-acetyltransferase -

Sequence

Protein


Download         Length: 237 a.a.        Molecular weight: 27159.01 Da        Isoelectric Point: 6.7418

>NTDB_id=201344 BKM67_RS01195 WP_024406828.1 218129..218842(+) (treR) [Streptococcus suis strain 1081]
MKKYQEIYNDLKEKIRTNVYPAESSLPTEQQLQEIYGVSRDTVRKALAILTEGGLIQKVQGRGSMVLKQEILNFPVSGLT
SYQELTNVLQISTKTDVVSLDMITVNSSLSHLTGFEPYSKVWKVVRTRSIDGKVSVVDTDYLAVDVVPELTTAIAEKSIY
EYLENKLGLDIAYAQKEITVEPTSREERDLMQSKDDYLVLIKSRVYLGDTQQFQYTESKHKIDKFRFVDFARRKHSL

Nucleotide


Download         Length: 714 bp        

>NTDB_id=201344 BKM67_RS01195 WP_024406828.1 218129..218842(+) (treR) [Streptococcus suis strain 1081]
ATGAAAAAATACCAAGAAATTTATAATGACTTAAAAGAAAAAATACGGACAAATGTTTATCCGGCAGAAAGCTCCCTACC
GACAGAACAGCAGCTTCAGGAAATCTATGGTGTTAGTCGTGATACGGTTCGTAAGGCGTTGGCGATTTTGACTGAGGGAG
GTTTGATTCAAAAAGTGCAAGGGCGTGGTTCAATGGTCCTTAAGCAAGAAATTCTCAATTTCCCAGTTTCAGGGTTAACT
TCCTATCAGGAATTGACAAATGTTCTCCAGATTTCTACCAAGACAGATGTTGTCAGCTTAGATATGATTACCGTTAATAG
TAGCCTTTCGCATTTAACAGGCTTTGAGCCGTATAGCAAGGTGTGGAAAGTTGTCCGTACACGTTCGATTGACGGTAAGG
TCTCCGTTGTGGATACAGATTATCTTGCTGTTGATGTCGTGCCAGAGTTGACAACTGCTATTGCTGAAAAATCCATTTAC
GAATACCTGGAAAATAAGTTAGGCCTCGATATTGCTTATGCACAAAAAGAGATTACGGTAGAGCCGACCAGTCGAGAAGA
GCGCGATCTAATGCAATCGAAGGATGATTATTTGGTCTTGATTAAATCTCGTGTCTATCTCGGTGATACCCAGCAATTCC
AATATACAGAAAGCAAGCATAAAATTGACAAATTCCGCTTTGTAGATTTTGCTCGTAGAAAGCATTCTTTATAG

Domains

Predicted by InterproScan.

Bacterial regulatory proteins, gntR family (GntR)

(3-66)

UTRA domain (UTRA)

(92-226)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB A0A2Z4PGS2

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  treR Streptococcus mutans UA159

52.564

98.734

0.519

Multiple sequence alignment