Detailed information
Bioinformatically predicted
Overview
| Name | pilH | Type | Machinery gene |
| Locus tag | CGU45_RS20135 | Genome accession | NZ_CP022526 |
| Coordinates | 4204400..4204765 (+) | Length | 121 a.a. |
| NCBI ID | WP_003084587.1 | Uniprot ID | A0A0H2ZKW2 |
| Organism | Pseudomonas aeruginosa strain Ocean-1155 | ||
| Function | type IV pilus biogenesis and function (predicted from homology) DNA binding and uptake |
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Genomic Context
Location: 4199400..4209765
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| CGU45_RS20105 (CGU45_20105) | pyrR | 4200022..4200534 (-) | 513 | WP_003084574.1 | bifunctional pyr operon transcriptional regulator/uracil phosphoribosyltransferase PyrR | - |
| CGU45_RS20110 (CGU45_20110) | ruvX | 4200646..4201080 (-) | 435 | WP_003084575.1 | Holliday junction resolvase RuvX | - |
| CGU45_RS20115 (CGU45_20115) | - | 4201080..4201649 (-) | 570 | WP_003084577.1 | YqgE/AlgH family protein | - |
| CGU45_RS20120 (CGU45_20120) | - | 4201698..4202591 (-) | 894 | WP_009315060.1 | energy transducer TonB | - |
| CGU45_RS20125 (CGU45_20125) | gshB | 4202738..4203691 (-) | 954 | WP_003100943.1 | glutathione synthase | - |
| CGU45_RS20130 (CGU45_20130) | pilG | 4203946..4204353 (+) | 408 | WP_003084583.1 | twitching motility response regulator PilG | Regulator |
| CGU45_RS20135 (CGU45_20135) | pilH | 4204400..4204765 (+) | 366 | WP_003084587.1 | twitching motility response regulator PilH | Machinery gene |
| CGU45_RS20140 (CGU45_20140) | - | 4204816..4205352 (+) | 537 | WP_003084590.1 | chemotaxis protein CheW | - |
| CGU45_RS20145 (CGU45_20145) | pilJ | 4205437..4207485 (+) | 2049 | WP_003084592.1 | chemotaxis chemoreceptor PilJ | - |
| CGU45_RS20150 (CGU45_20150) | pilK | 4207546..4208421 (+) | 876 | WP_003084594.1 | type 4 fimbrial methyltransferase PilK | - |
Sequence
Protein
Download Length: 121 a.a. Molecular weight: 13273.30 Da Isoelectric Point: 5.1961
>NTDB_id=201344 CGU45_RS20135 WP_003084587.1 4204400..4204765(+) (pilH) [Pseudomonas aeruginosa strain Ocean-1155]
MARILIVDDSPTEMYKLTAMLEKHGHQVLKAENGGDGVALARQEKPDVVLMDIVMPGLNGFQATRQLTKDAETSAIPVII
VTTKDQETDKVWGKRQGARDYLTKPVDEETLLKTINAVLAG
MARILIVDDSPTEMYKLTAMLEKHGHQVLKAENGGDGVALARQEKPDVVLMDIVMPGLNGFQATRQLTKDAETSAIPVII
VTTKDQETDKVWGKRQGARDYLTKPVDEETLLKTINAVLAG
Nucleotide
Download Length: 366 bp
>NTDB_id=201344 CGU45_RS20135 WP_003084587.1 4204400..4204765(+) (pilH) [Pseudomonas aeruginosa strain Ocean-1155]
ATGGCTCGTATTTTGATTGTTGATGACTCTCCGACCGAGATGTACAAGCTGACCGCCATGCTGGAAAAGCATGGTCACCA
GGTACTCAAGGCCGAGAACGGCGGCGACGGCGTCGCCCTGGCCCGCCAGGAAAAGCCCGACGTGGTCCTGATGGACATCG
TCATGCCCGGCCTCAACGGCTTCCAGGCGACCCGTCAATTGACCAAGGACGCCGAGACCAGCGCCATCCCGGTGATCATC
GTCACCACCAAGGACCAGGAGACCGACAAGGTCTGGGGCAAGCGCCAGGGCGCTCGCGACTACCTGACCAAGCCGGTGGA
CGAAGAGACCCTGCTGAAAACCATCAATGCGGTGCTGGCGGGCTGA
ATGGCTCGTATTTTGATTGTTGATGACTCTCCGACCGAGATGTACAAGCTGACCGCCATGCTGGAAAAGCATGGTCACCA
GGTACTCAAGGCCGAGAACGGCGGCGACGGCGTCGCCCTGGCCCGCCAGGAAAAGCCCGACGTGGTCCTGATGGACATCG
TCATGCCCGGCCTCAACGGCTTCCAGGCGACCCGTCAATTGACCAAGGACGCCGAGACCAGCGCCATCCCGGTGATCATC
GTCACCACCAAGGACCAGGAGACCGACAAGGTCTGGGGCAAGCGCCAGGGCGCTCGCGACTACCTGACCAAGCCGGTGGA
CGAAGAGACCCTGCTGAAAACCATCAATGCGGTGCTGGCGGGCTGA
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| pilH | Synechocystis sp. PCC 6803 |
36.975 |
98.347 |
0.364 |