Detailed information
Bioinformatically predicted
Overview
| Name | tsaP | Type | Machinery gene |
| Locus tag | CGU46_RS08705 | Genome accession | NZ_CP022525 |
| Coordinates | 1828360..1829385 (-) | Length | 341 a.a. |
| NCBI ID | WP_003097294.1 | Uniprot ID | A0A0H2ZJL6 |
| Organism | Pseudomonas aeruginosa strain Ocean-1175 | ||
| Function | assembly of type IV pilus (predicted from homology) DNA binding and uptake |
||
Genomic Context
Location: 1823360..1834385
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| CGU46_RS08680 (CGU46_08680) | aroE | 1823562..1824386 (-) | 825 | WP_003097314.1 | shikimate dehydrogenase | - |
| CGU46_RS08685 (CGU46_08685) | hemF | 1824444..1825361 (-) | 918 | WP_003097311.1 | oxygen-dependent coproporphyrinogen oxidase | - |
| CGU46_RS08690 (CGU46_08690) | - | 1825552..1826529 (+) | 978 | WP_023100694.1 | NADPH:quinone reductase | - |
| CGU46_RS08695 (CGU46_08695) | - | 1826539..1827096 (-) | 558 | WP_003097300.1 | L-threonylcarbamoyladenylate synthase | - |
| CGU46_RS08700 (CGU46_08700) | dprA | 1827137..1828225 (-) | 1089 | WP_023100693.1 | DNA-processing protein DprA | Machinery gene |
| CGU46_RS08705 (CGU46_08705) | tsaP | 1828360..1829385 (-) | 1026 | WP_003097294.1 | LysM peptidoglycan-binding domain-containing protein | Machinery gene |
| CGU46_RS08710 (CGU46_08710) | def | 1829524..1830030 (+) | 507 | WP_003097293.1 | peptide deformylase | - |
| CGU46_RS08715 (CGU46_08715) | fmt | 1830085..1831029 (+) | 945 | WP_023100692.1 | methionyl-tRNA formyltransferase | - |
| CGU46_RS08720 (CGU46_08720) | rsmB | 1831026..1832330 (+) | 1305 | WP_023100691.1 | 16S rRNA (cytosine(967)-C(5))-methyltransferase RsmB | - |
| CGU46_RS08725 (CGU46_08725) | trkA | 1832357..1833730 (+) | 1374 | WP_003111375.1 | Trk system potassium transporter TrkA | - |
| CGU46_RS08730 (CGU46_08730) | - | 1833878..1834195 (+) | 318 | WP_003097288.1 | tetratricopeptide repeat protein | - |
Sequence
Protein
Download Length: 341 a.a. Molecular weight: 37586.01 Da Isoelectric Point: 9.3358
>NTDB_id=201191 CGU46_RS08705 WP_003097294.1 1828360..1829385(-) (tsaP) [Pseudomonas aeruginosa strain Ocean-1175]
MRKSLVALLLLAASGLAQAQVDLREGHPDRYTVVRGDTLWDISGKFLRQPWKWPELWHANPQIQNPHLIYPGDTLSLVYV
DGQPRLVLNRGESRGTIKLSPKIRSTPIAEAIPTIPLDKINSFLLANRIVDDEKTFTSAPYIVAGNAERIVSGTGDRIYA
RGKFADGQPAYGIFRQGKVYIDPKTKEVLGINADDIGGGEVVATEGDVATLALTRTTQEVRLGDRLFPTEERAVNSTFMP
GEPSREVKGEIIDVPRGVTQIGQFDVVTLNRGQRDGLAEGNVLAIYKVGETVRDRVTGESVKIPDERAGLLMVFRTYKKL
SYALVLMASRPLSVTDRVQNP
MRKSLVALLLLAASGLAQAQVDLREGHPDRYTVVRGDTLWDISGKFLRQPWKWPELWHANPQIQNPHLIYPGDTLSLVYV
DGQPRLVLNRGESRGTIKLSPKIRSTPIAEAIPTIPLDKINSFLLANRIVDDEKTFTSAPYIVAGNAERIVSGTGDRIYA
RGKFADGQPAYGIFRQGKVYIDPKTKEVLGINADDIGGGEVVATEGDVATLALTRTTQEVRLGDRLFPTEERAVNSTFMP
GEPSREVKGEIIDVPRGVTQIGQFDVVTLNRGQRDGLAEGNVLAIYKVGETVRDRVTGESVKIPDERAGLLMVFRTYKKL
SYALVLMASRPLSVTDRVQNP
Nucleotide
Download Length: 1026 bp
>NTDB_id=201191 CGU46_RS08705 WP_003097294.1 1828360..1829385(-) (tsaP) [Pseudomonas aeruginosa strain Ocean-1175]
ATGAGGAAATCACTAGTCGCCCTTCTGCTCCTTGCCGCGAGCGGTCTGGCGCAGGCCCAGGTCGACCTCAGGGAAGGGCA
TCCGGACCGCTACACGGTGGTCAGGGGCGATACCCTGTGGGACATCTCGGGGAAATTCCTCCGCCAGCCATGGAAGTGGC
CGGAACTCTGGCACGCCAACCCGCAGATCCAGAATCCCCACCTGATCTACCCCGGCGACACCCTCAGCCTGGTTTACGTC
GATGGCCAGCCGCGCCTGGTGCTGAACCGTGGCGAATCGCGCGGGACCATCAAGCTGTCGCCGAAGATCCGCAGCACGCC
GATCGCCGAGGCTATCCCGACCATCCCGCTGGACAAGATCAACAGCTTCCTGCTGGCCAACCGCATCGTCGATGACGAGA
AGACCTTCACCAGTGCGCCGTACATCGTCGCCGGCAACGCCGAGCGGATCGTCAGCGGCACCGGCGACCGCATCTACGCC
CGCGGCAAGTTCGCCGACGGCCAGCCGGCCTATGGCATCTTCCGCCAGGGCAAGGTCTACATCGATCCGAAGACCAAGGA
AGTCCTCGGCATCAACGCCGACGACATCGGCGGCGGCGAGGTGGTGGCCACCGAAGGCGACGTCGCGACCCTGGCGCTGA
CCCGCACCACCCAGGAAGTGCGCCTGGGCGACCGCCTGTTCCCCACCGAGGAGCGTGCGGTGAATTCCACCTTCATGCCC
GGCGAGCCGAGCCGCGAGGTGAAGGGCGAAATCATCGACGTACCGCGCGGCGTGACCCAGATCGGCCAGTTCGACGTGGT
CACCCTGAACCGTGGCCAGCGCGACGGGCTGGCCGAGGGCAACGTGCTGGCGATCTACAAGGTCGGCGAGACGGTGCGCG
ACCGCGTTACCGGTGAGTCGGTGAAGATTCCCGACGAACGCGCCGGCCTGCTGATGGTGTTCCGTACCTACAAGAAGCTG
AGCTACGCCCTGGTTCTGATGGCCAGCAGGCCGCTCTCGGTAACCGACAGGGTGCAGAATCCCTGA
ATGAGGAAATCACTAGTCGCCCTTCTGCTCCTTGCCGCGAGCGGTCTGGCGCAGGCCCAGGTCGACCTCAGGGAAGGGCA
TCCGGACCGCTACACGGTGGTCAGGGGCGATACCCTGTGGGACATCTCGGGGAAATTCCTCCGCCAGCCATGGAAGTGGC
CGGAACTCTGGCACGCCAACCCGCAGATCCAGAATCCCCACCTGATCTACCCCGGCGACACCCTCAGCCTGGTTTACGTC
GATGGCCAGCCGCGCCTGGTGCTGAACCGTGGCGAATCGCGCGGGACCATCAAGCTGTCGCCGAAGATCCGCAGCACGCC
GATCGCCGAGGCTATCCCGACCATCCCGCTGGACAAGATCAACAGCTTCCTGCTGGCCAACCGCATCGTCGATGACGAGA
AGACCTTCACCAGTGCGCCGTACATCGTCGCCGGCAACGCCGAGCGGATCGTCAGCGGCACCGGCGACCGCATCTACGCC
CGCGGCAAGTTCGCCGACGGCCAGCCGGCCTATGGCATCTTCCGCCAGGGCAAGGTCTACATCGATCCGAAGACCAAGGA
AGTCCTCGGCATCAACGCCGACGACATCGGCGGCGGCGAGGTGGTGGCCACCGAAGGCGACGTCGCGACCCTGGCGCTGA
CCCGCACCACCCAGGAAGTGCGCCTGGGCGACCGCCTGTTCCCCACCGAGGAGCGTGCGGTGAATTCCACCTTCATGCCC
GGCGAGCCGAGCCGCGAGGTGAAGGGCGAAATCATCGACGTACCGCGCGGCGTGACCCAGATCGGCCAGTTCGACGTGGT
CACCCTGAACCGTGGCCAGCGCGACGGGCTGGCCGAGGGCAACGTGCTGGCGATCTACAAGGTCGGCGAGACGGTGCGCG
ACCGCGTTACCGGTGAGTCGGTGAAGATTCCCGACGAACGCGCCGGCCTGCTGATGGTGTTCCGTACCTACAAGAAGCTG
AGCTACGCCCTGGTTCTGATGGCCAGCAGGCCGCTCTCGGTAACCGACAGGGTGCAGAATCCCTGA
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| tsaP | Acinetobacter baumannii D1279779 |
36.512 |
100 |
0.393 |