Detailed information
Bioinformatically predicted
Overview
| Name | pilH | Type | Machinery gene |
| Locus tag | CGU46_RS06685 | Genome accession | NZ_CP022525 |
| Coordinates | 1409826..1410191 (-) | Length | 121 a.a. |
| NCBI ID | WP_003084587.1 | Uniprot ID | A0A0H2ZKW2 |
| Organism | Pseudomonas aeruginosa strain Ocean-1175 | ||
| Function | type IV pilus biogenesis and function (predicted from homology) DNA binding and uptake |
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Genomic Context
Location: 1404826..1415191
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| CGU46_RS06670 (CGU46_06670) | pilK | 1406170..1407045 (-) | 876 | WP_003084594.1 | type 4 fimbrial methyltransferase PilK | - |
| CGU46_RS06675 (CGU46_06675) | pilJ | 1407106..1409154 (-) | 2049 | WP_003084592.1 | chemotaxis chemoreceptor PilJ | - |
| CGU46_RS06680 (CGU46_06680) | - | 1409239..1409775 (-) | 537 | WP_003084590.1 | chemotaxis protein CheW | - |
| CGU46_RS06685 (CGU46_06685) | pilH | 1409826..1410191 (-) | 366 | WP_003084587.1 | twitching motility response regulator PilH | Machinery gene |
| CGU46_RS06690 (CGU46_06690) | pilG | 1410238..1410645 (-) | 408 | WP_003084583.1 | twitching motility response regulator PilG | Regulator |
| CGU46_RS06695 (CGU46_06695) | gshB | 1410900..1411853 (+) | 954 | WP_003100943.1 | glutathione synthase | - |
| CGU46_RS06700 (CGU46_06700) | - | 1412000..1412893 (+) | 894 | WP_009315060.1 | energy transducer TonB | - |
| CGU46_RS06705 (CGU46_06705) | - | 1412942..1413511 (+) | 570 | WP_003084577.1 | YqgE/AlgH family protein | - |
| CGU46_RS06710 (CGU46_06710) | ruvX | 1413511..1413945 (+) | 435 | WP_003084575.1 | Holliday junction resolvase RuvX | - |
| CGU46_RS06715 (CGU46_06715) | pyrR | 1414057..1414569 (+) | 513 | WP_003084574.1 | bifunctional pyr operon transcriptional regulator/uracil phosphoribosyltransferase PyrR | - |
Sequence
Protein
Download Length: 121 a.a. Molecular weight: 13273.30 Da Isoelectric Point: 5.1961
>NTDB_id=201184 CGU46_RS06685 WP_003084587.1 1409826..1410191(-) (pilH) [Pseudomonas aeruginosa strain Ocean-1175]
MARILIVDDSPTEMYKLTAMLEKHGHQVLKAENGGDGVALARQEKPDVVLMDIVMPGLNGFQATRQLTKDAETSAIPVII
VTTKDQETDKVWGKRQGARDYLTKPVDEETLLKTINAVLAG
MARILIVDDSPTEMYKLTAMLEKHGHQVLKAENGGDGVALARQEKPDVVLMDIVMPGLNGFQATRQLTKDAETSAIPVII
VTTKDQETDKVWGKRQGARDYLTKPVDEETLLKTINAVLAG
Nucleotide
Download Length: 366 bp
>NTDB_id=201184 CGU46_RS06685 WP_003084587.1 1409826..1410191(-) (pilH) [Pseudomonas aeruginosa strain Ocean-1175]
ATGGCTCGTATTTTGATTGTTGATGACTCTCCGACCGAGATGTACAAGCTGACCGCCATGCTGGAAAAGCATGGTCACCA
GGTACTCAAGGCCGAGAACGGCGGCGACGGCGTCGCCCTGGCCCGCCAGGAAAAGCCCGACGTGGTCCTGATGGACATCG
TCATGCCCGGCCTCAACGGCTTCCAGGCGACCCGTCAATTGACCAAGGACGCCGAGACCAGCGCCATCCCGGTGATCATC
GTCACCACCAAGGACCAGGAGACCGACAAGGTCTGGGGCAAGCGCCAGGGCGCTCGCGACTACCTGACCAAGCCGGTGGA
CGAAGAGACCCTGCTGAAAACCATCAATGCGGTGCTGGCGGGCTGA
ATGGCTCGTATTTTGATTGTTGATGACTCTCCGACCGAGATGTACAAGCTGACCGCCATGCTGGAAAAGCATGGTCACCA
GGTACTCAAGGCCGAGAACGGCGGCGACGGCGTCGCCCTGGCCCGCCAGGAAAAGCCCGACGTGGTCCTGATGGACATCG
TCATGCCCGGCCTCAACGGCTTCCAGGCGACCCGTCAATTGACCAAGGACGCCGAGACCAGCGCCATCCCGGTGATCATC
GTCACCACCAAGGACCAGGAGACCGACAAGGTCTGGGGCAAGCGCCAGGGCGCTCGCGACTACCTGACCAAGCCGGTGGA
CGAAGAGACCCTGCTGAAAACCATCAATGCGGTGCTGGCGGGCTGA
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| pilH | Synechocystis sp. PCC 6803 |
36.975 |
98.347 |
0.364 |