Detailed information
Bioinformatically predicted
Overview
| Name | pilH | Type | Machinery gene |
| Locus tag | CEK59_RS28355 | Genome accession | NZ_CP022478 |
| Coordinates | 5972555..5972920 (+) | Length | 121 a.a. |
| NCBI ID | WP_003084587.1 | Uniprot ID | A0A0H2ZKW2 |
| Organism | Pseudomonas aeruginosa strain LW | ||
| Function | type IV pilus biogenesis and function (predicted from homology) DNA binding and uptake |
||
Genomic Context
Location: 5967555..5977920
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| CEK59_RS28325 (CEK59_28215) | pyrR | 5968177..5968689 (-) | 513 | WP_003084574.1 | bifunctional pyr operon transcriptional regulator/uracil phosphoribosyltransferase PyrR | - |
| CEK59_RS28330 (CEK59_28220) | ruvX | 5968801..5969235 (-) | 435 | WP_003084575.1 | Holliday junction resolvase RuvX | - |
| CEK59_RS28335 (CEK59_28225) | - | 5969235..5969804 (-) | 570 | WP_003084577.1 | YqgE/AlgH family protein | - |
| CEK59_RS28340 (CEK59_28230) | - | 5969853..5970746 (-) | 894 | WP_003084580.1 | TonB family protein | - |
| CEK59_RS28345 (CEK59_28235) | gshB | 5970893..5971846 (-) | 954 | WP_003110019.1 | glutathione synthase | - |
| CEK59_RS28350 (CEK59_28240) | pilG | 5972101..5972508 (+) | 408 | WP_127891103.1 | twitching motility response regulator PilG | Regulator |
| CEK59_RS28355 (CEK59_28245) | pilH | 5972555..5972920 (+) | 366 | WP_003084587.1 | twitching motility response regulator PilH | Machinery gene |
| CEK59_RS28360 (CEK59_28250) | - | 5972971..5973507 (+) | 537 | WP_003084590.1 | chemotaxis protein CheW | - |
| CEK59_RS28365 (CEK59_28255) | pilJ | 5973592..5975640 (+) | 2049 | WP_003084592.1 | chemotaxis chemoreceptor PilJ | - |
| CEK59_RS28370 (CEK59_28260) | pilK | 5975701..5976576 (+) | 876 | WP_003084594.1 | type 4 fimbrial methyltransferase PilK | - |
Sequence
Protein
Download Length: 121 a.a. Molecular weight: 13273.30 Da Isoelectric Point: 5.1961
>NTDB_id=201160 CEK59_RS28355 WP_003084587.1 5972555..5972920(+) (pilH) [Pseudomonas aeruginosa strain LW]
MARILIVDDSPTEMYKLTAMLEKHGHQVLKAENGGDGVALARQEKPDVVLMDIVMPGLNGFQATRQLTKDAETSAIPVII
VTTKDQETDKVWGKRQGARDYLTKPVDEETLLKTINAVLAG
MARILIVDDSPTEMYKLTAMLEKHGHQVLKAENGGDGVALARQEKPDVVLMDIVMPGLNGFQATRQLTKDAETSAIPVII
VTTKDQETDKVWGKRQGARDYLTKPVDEETLLKTINAVLAG
Nucleotide
Download Length: 366 bp
>NTDB_id=201160 CEK59_RS28355 WP_003084587.1 5972555..5972920(+) (pilH) [Pseudomonas aeruginosa strain LW]
ATGGCTCGTATTTTGATTGTTGATGACTCTCCGACCGAGATGTACAAGCTGACCGCCATGCTGGAAAAGCATGGCCACCA
GGTACTCAAGGCCGAGAACGGCGGCGACGGCGTCGCCCTGGCCCGCCAGGAAAAGCCCGACGTGGTCCTGATGGACATCG
TCATGCCCGGCCTCAACGGCTTCCAGGCGACCCGTCAGTTGACCAAGGACGCCGAGACCAGCGCCATCCCGGTGATCATC
GTCACCACCAAGGACCAGGAGACCGACAAGGTCTGGGGCAAGCGCCAGGGCGCGCGCGACTACCTGACCAAACCGGTGGA
CGAAGAGACCCTGCTGAAAACCATCAATGCGGTGCTGGCGGGCTGA
ATGGCTCGTATTTTGATTGTTGATGACTCTCCGACCGAGATGTACAAGCTGACCGCCATGCTGGAAAAGCATGGCCACCA
GGTACTCAAGGCCGAGAACGGCGGCGACGGCGTCGCCCTGGCCCGCCAGGAAAAGCCCGACGTGGTCCTGATGGACATCG
TCATGCCCGGCCTCAACGGCTTCCAGGCGACCCGTCAGTTGACCAAGGACGCCGAGACCAGCGCCATCCCGGTGATCATC
GTCACCACCAAGGACCAGGAGACCGACAAGGTCTGGGGCAAGCGCCAGGGCGCGCGCGACTACCTGACCAAACCGGTGGA
CGAAGAGACCCTGCTGAAAACCATCAATGCGGTGCTGGCGGGCTGA
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| pilH | Synechocystis sp. PCC 6803 |
36.975 |
98.347 |
0.364 |