Detailed information NTG0201112

Bioinformatically predicted

Overview

• Name: pilQ
• Type: Machinery gene
• Locus tag: KAB06_RS17565
• Genome accession: NZ_CP017652
• Coordinates: 3660722..3662884 (-)
• Length: 720 a.a.
• NCBI ID: WP_033503048.1
• Uniprot ID: -
• Organism: Acinetobacter baumannii strain KAB06
• Function: assembly of type IV pilus (predicted from homology) DNA binding and uptake

Genomic Context

Location: 3655722..3667884

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
KAB06_RS17550 (KAB06_03555)	-	3658139..3659014 (-)	876	WP_000218802.1	hypothetical protein	-
KAB06_RS17555 (KAB06_03556)	aroB	3659030..3660112 (-)	1083	WP_001193997.1	3-dehydroquinate synthase	-
KAB06_RS17560 (KAB06_03557)	aroK	3660141..3660710 (-)	570	WP_000643712.1	shikimate kinase AroK	-
KAB06_RS17565 (KAB06_03558)	pilQ	3660722..3662884 (-)	2163	WP_033503048.1	type IV pilus secretin PilQ family protein	Machinery gene
KAB06_RS17570 (KAB06_03559)	pilP	3662952..3663479 (-)	528	WP_000695065.1	pilus assembly protein PilP	Machinery gene
KAB06_RS17575 (KAB06_03560)	pilO	3663490..3664230 (-)	741	WP_000076101.1	type 4a pilus biogenesis protein PilO	Machinery gene
KAB06_RS17580 (KAB06_03561)	pilN	3664227..3664868 (-)	642	WP_000201227.1	PilN domain-containing protein	Machinery gene
KAB06_RS17585 (KAB06_03562)	pilM	3664868..3665926 (-)	1059	WP_002014066.1	pilus assembly protein PilM	Machinery gene

Sequence

Protein

• Length: 720 a.a.
• Molecular weight: 77762.17 Da
• Isoelectric Point: 6.9039

>NTDB_id=201112 KAB06_RS17565 WP_033503048.1 3660722..3662884(-) (pilQ) [Acinetobacter baumannii strain KAB06]
MNHVFRQFSMGAVAIAIMQAASAQVSMTNIVPMQIAGQGTEIRVMFNGLPPQPQAYQLENPSRLILDFDKAQQGLKQSKI
SVATNEASSVDVTSDDQRSRLTVNLKDAGAFTTRVEGNTFILKINSAQTSNKPLPVVSAQPQGVSNIGFQRGSQGEGLVV
VDLLGSNTPVDVQQQGSKVVIRTIGTKIPTHLARRLNVNDFATPVSSIDAYNDKGVGVITIQSSGSYEYMAYQAENKLTI
SLKRPQDKNVTSLYKTPNYSGNKLSLDFQDIEVRRVLQLLADFTGINMVAADSVQGNITLRLKDVPWDQALDIILKTKNL
DKRRNGNVIWIAPVAELIKAEEEAKAVAQSVKLAPLQTEYIQLKYAKAGDIMGLITQGSNNSNGLQHTSGGGTSTSTNLN
TGVDSLGNNVGSLLSPRGTITQDDRTNTLIINDTAQSIDQIRKMIDLLDVQVKQVMVEARIVRASTSFTKELGVKWGILS
QGITNNNNLLVGGSETTLWNLREPKKDETTGGYKYTIERPDNLNVDLGVSNPAGSIAFGLISMSDFMLDLELSALQADGY
GEVISTPKVMTADKQTAKVATGQQVPYQSTTNSAAGSTATTSFKDALLSLNVTPSITPDGKIQMKLDISKDSVAGAAPNG
ELILNKNNINTNVLVDNGETVILGGVFEQTTMNSQTKVPFFGDIPVVGRLFRKDVKSDDKQELLIFVTPRIVNDTLARNH

Nucleotide

• Length: 2163 bp

>NTDB_id=201112 KAB06_RS17565 WP_033503048.1 3660722..3662884(-) (pilQ) [Acinetobacter baumannii strain KAB06]
ATGAATCACGTATTCCGTCAGTTTTCTATGGGGGCTGTAGCTATTGCGATTATGCAGGCTGCATCTGCACAGGTCAGCAT
GACCAACATTGTACCAATGCAAATTGCAGGTCAGGGCACAGAAATTAGAGTCATGTTTAATGGCTTGCCACCACAACCAC
AAGCTTACCAACTTGAAAATCCTTCACGTTTAATCCTTGATTTTGATAAGGCACAGCAAGGTTTAAAACAATCTAAAATT
AGTGTTGCAACTAATGAGGCAAGTTCTGTAGATGTTACTTCAGATGACCAGCGCTCACGTTTAACTGTAAACCTAAAAGA
TGCTGGAGCATTTACAACACGAGTCGAAGGCAATACTTTCATTTTAAAAATTAATTCTGCTCAAACAAGTAATAAGCCGC
TACCTGTGGTCTCAGCACAACCACAGGGAGTTTCAAATATTGGCTTTCAGCGTGGTAGTCAGGGAGAAGGCCTGGTTGTT
GTAGATCTTTTAGGAAGTAATACGCCTGTAGATGTTCAGCAGCAGGGTAGTAAAGTCGTTATAAGAACAATAGGTACAAA
AATCCCGACACATTTAGCGCGTCGCTTAAATGTAAATGATTTTGCAACCCCGGTTTCAAGTATCGATGCTTATAATGATA
AAGGGGTTGGTGTAATAACTATCCAGTCCTCTGGTAGCTATGAATATATGGCCTATCAGGCGGAGAATAAGCTCACGATC
AGTTTGAAACGTCCCCAAGATAAAAATGTTACCTCTTTATATAAAACGCCAAATTATTCAGGAAATAAACTTTCATTAGA
CTTCCAAGATATTGAAGTACGCCGTGTGTTGCAATTACTTGCTGATTTTACAGGCATCAATATGGTAGCTGCCGATAGTG
TACAAGGTAATATCACACTACGTTTAAAAGATGTACCTTGGGATCAGGCTCTTGATATTATTTTAAAAACTAAAAATCTT
GATAAACGCCGTAATGGCAATGTGATTTGGATTGCTCCAGTTGCAGAATTGATTAAAGCGGAAGAAGAAGCGAAAGCTGT
TGCACAAAGTGTCAAACTTGCACCCTTACAGACTGAGTATATTCAACTGAAGTATGCTAAAGCTGGCGATATTATGGGTC
TCATTACACAAGGCTCAAATAATAGTAATGGCTTACAACATACTTCTGGTGGAGGGACCTCAACTTCAACCAATTTAAAT
ACTGGAGTTGATAGTCTAGGCAATAATGTGGGTAGTTTGCTTAGCCCGCGTGGCACTATTACTCAAGATGACCGAACTAA
TACTCTTATTATTAACGATACTGCTCAGTCAATTGATCAAATTCGTAAAATGATTGACTTGCTTGATGTGCAAGTTAAAC
AAGTTATGGTTGAAGCACGTATTGTGAGAGCCTCTACGTCATTTACCAAAGAACTTGGTGTGAAGTGGGGTATTCTGTCG
CAAGGTATTACCAATAACAACAATTTGCTGGTTGGCGGTAGTGAAACAACTTTATGGAATTTACGCGAACCTAAAAAAGA
TGAAACTACAGGTGGGTATAAATATACGATTGAGCGCCCAGATAACTTAAACGTGGATTTAGGAGTTTCTAATCCTGCAG
GAAGTATTGCTTTTGGCTTGATTAGTATGTCTGACTTTATGTTAGATCTTGAATTGTCTGCTTTACAAGCGGATGGTTAT
GGTGAGGTTATTTCTACCCCTAAAGTCATGACTGCCGATAAACAAACAGCGAAAGTTGCAACTGGTCAACAAGTTCCATA
TCAATCTACAACTAACTCTGCAGCAGGTTCAACTGCTACAACATCTTTTAAAGATGCTTTGCTGAGTTTAAATGTGACAC
CAAGTATTACACCTGATGGCAAGATTCAAATGAAGTTGGATATTTCTAAGGATTCTGTAGCGGGTGCGGCTCCAAATGGA
GAGTTGATTTTAAATAAAAATAATATCAACACCAATGTATTGGTAGATAATGGCGAAACTGTCATTTTGGGTGGTGTTTT
TGAGCAAACAACTATGAATTCACAAACCAAAGTTCCTTTCTTTGGTGATATTCCTGTTGTTGGGCGTTTATTTAGAAAAG
ATGTAAAGTCTGATGATAAACAAGAGTTGCTGATTTTCGTTACACCACGAATTGTTAATGACACTTTAGCGAGAAATCAT
TAA

Domains

Predicted by InterproScan.

• Secretin and TonB N terminus short domain (STN) (291-333)

• Bacterial type II and III secretion system protein (Secretin) (554-712)

• Bacterial type II/III secretion system short domain (Secretin_N) (359-454)

• AMIN domain (AMIN) (39-121)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
pilQ	Acinetobacter baumannii D1279779	99.861	100	1
pilQ	Acinetobacter baumannii strain A118	99.723	100	0.999
comQ	Acinetobacter baylyi ADP1	75.38	100	0.757
pilQ	Pseudomonas aeruginosa PAK	40.42	99.306	0.401