Detailed information NTG0201096

Bioinformatically predicted

Overview

• Name: xcpW
• Type: Machinery gene
• Locus tag: KAB06_RS08475
• Genome accession: NZ_CP017652
• Coordinates: 1769935..1770636 (+)
• Length: 233 a.a.
• NCBI ID: WP_000594589.1
• Uniprot ID: A0A9P3CZ31
• Organism: Acinetobacter baumannii strain KAB06
• Function: pseudopilus assembly (predicted from homology) DNA binding and uptake

Genomic Context

Location: 1764935..1775636

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
KAB06_RS08440 (KAB06_01709)	kdsB	1765458..1766219 (+)	762	WP_000680697.1	3-deoxy-manno-octulosonate cytidylyltransferase	-
KAB06_RS08445 (KAB06_01710)	-	1766231..1767211 (+)	981	WP_001075411.1	DNA polymerase III subunit delta'	-
KAB06_RS08450 (KAB06_01711)	-	1767223..1767564 (+)	342	WP_001183024.1	PilZ domain-containing protein	-
KAB06_RS08455 (KAB06_01712)	-	1767582..1768355 (+)	774	WP_000497298.1	TatD family hydrolase	-
KAB06_RS08460 (KAB06_01713)	-	1768393..1769001 (+)	609	WP_000375838.1	TetR/AcrR family transcriptional regulator	-
KAB06_RS08465 (KAB06_01714)	-	1769011..1769565 (+)	555	WP_000841373.1	type II secretion system protein	-
KAB06_RS08470 (KAB06_01715)	xcpV	1769555..1769935 (+)	381	WP_000836911.1	type II secretion system minor pseudopilin GspI	Machinery gene
KAB06_RS08475 (KAB06_01716)	xcpW	1769935..1770636 (+)	702	WP_000594589.1	type II secretion system minor pseudopilin GspJ	Machinery gene
KAB06_RS08480 (KAB06_01717)	gspK	1770636..1771595 (+)	960	WP_000301476.1	type II secretion system minor pseudopilin GspK	-
KAB06_RS08485 (KAB06_01718)	-	1771826..1772422 (+)	597	WP_000908452.1	6-pyruvoyl trahydropterin synthase family protein	-
KAB06_RS08490 (KAB06_01719)	ung	1772473..1773186 (+)	714	WP_001177528.1	uracil-DNA glycosylase	-
KAB06_RS08495 (KAB06_01720)	-	1773183..1774307 (+)	1125	WP_001983908.1	enoyl-CoA hydratase/isomerase family protein	-
KAB06_RS08500 (KAB06_01721)	tadA	1774314..1774817 (+)	504	WP_000033178.1	tRNA adenosine(34) deaminase TadA	-
KAB06_RS08505 (KAB06_01722)	-	1774887..1775330 (+)	444	WP_001246675.1	SRPBCC family protein	-

Sequence

Protein

• Length: 233 a.a.
• Molecular weight: 26639.58 Da
• Isoelectric Point: 9.3468

>NTDB_id=201096 KAB06_RS08475 WP_000594589.1 1769935..1770636(+) (xcpW) [Acinetobacter baumannii strain KAB06]
MIKNKYIHIRSIDSRLAARSSSARLTRASGFTLVELLVAIAIFAVLSLLGWKIFDYLLKVRDRNAEHEVHLFELQDAYQQ
ILRDTLQIIPLSANQGGQLHPALEIDNQILRFSKAGVTDPLKQGLSPFERIEYRYDADQKKLYRLKYTNLNTSNREQPLS
STLLSQVDQYQIMVLTPQEVTKWPEVNIDPTKPNELKKLPKGIKIQLTVAGVNYEWIYSLNQGDLSLSQEGNS

Nucleotide

• Length: 702 bp

>NTDB_id=201096 KAB06_RS08475 WP_000594589.1 1769935..1770636(+) (xcpW) [Acinetobacter baumannii strain KAB06]
ATGATAAAAAATAAATATATTCACATCCGAAGCATTGATTCTCGCCTTGCAGCACGATCGAGCAGTGCTCGATTAACTCG
CGCCTCAGGATTTACTTTGGTTGAATTGTTAGTCGCGATCGCTATCTTTGCGGTTTTATCTTTATTGGGGTGGAAAATTT
TCGATTACTTGCTCAAAGTTCGTGATCGTAATGCCGAACATGAAGTGCATTTATTTGAATTACAAGATGCTTATCAACAA
ATTCTTCGTGATACTTTGCAGATTATCCCTTTATCCGCAAACCAAGGTGGTCAACTTCATCCAGCTTTAGAAATCGATAA
TCAAATTTTACGTTTTAGCAAAGCAGGCGTAACGGATCCTTTAAAACAAGGCTTATCACCATTTGAACGAATTGAATATC
GTTATGATGCAGACCAAAAAAAATTATATCGTCTTAAATATACAAATTTGAATACTTCGAACAGAGAGCAACCTTTATCG
AGTACTTTGTTAAGTCAAGTCGACCAATATCAGATTATGGTTTTGACTCCGCAAGAAGTCACAAAATGGCCCGAGGTTAA
TATTGATCCAACGAAACCTAATGAGTTAAAAAAATTACCGAAAGGGATAAAAATCCAACTTACAGTCGCTGGTGTAAATT
ATGAGTGGATTTATAGCTTAAATCAGGGTGACTTATCGCTTTCGCAGGAAGGTAATTCATAA

Domains

Predicted by InterproScan.

• Prokaryotic N-terminal methylation motif (N_methyl) (27-49)

• Type II secretion system (T2SS), protein J (T2SSJ) (83-212)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
xcpW	Acinetobacter baumannii D1279779	99.571	100	0.996