Detailed information NTG0201048

Bioinformatically predicted

Overview

• Name: xcpW
• Type: Machinery gene
• Locus tag: KAB04_RS10715
• Genome accession: NZ_CP017648
• Coordinates: 2239169..2239870 (-)
• Length: 233 a.a.
• NCBI ID: WP_000594589.1
• Uniprot ID: A0A9P3CZ31
• Organism: Acinetobacter baumannii strain KAB04
• Function: pseudopilus assembly (predicted from homology) DNA binding and uptake

Genomic Context

Location: 2234169..2244870

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
KAB04_RS10685 (KAB04_02164)	-	2234475..2234918 (-)	444	WP_001246675.1	SRPBCC family protein	-
KAB04_RS10690 (KAB04_02165)	tadA	2234988..2235491 (-)	504	WP_000033178.1	tRNA adenosine(34) deaminase TadA	-
KAB04_RS10695 (KAB04_02166)	-	2235498..2236622 (-)	1125	WP_001983908.1	enoyl-CoA hydratase/isomerase family protein	-
KAB04_RS10700 (KAB04_02167)	ung	2236619..2237332 (-)	714	WP_001177528.1	uracil-DNA glycosylase	-
KAB04_RS10705 (KAB04_02168)	-	2237383..2237979 (-)	597	WP_000908452.1	6-pyruvoyl trahydropterin synthase family protein	-
KAB04_RS10710 (KAB04_02169)	gspK	2238210..2239169 (-)	960	WP_000301476.1	type II secretion system minor pseudopilin GspK	-
KAB04_RS10715 (KAB04_02170)	xcpW	2239169..2239870 (-)	702	WP_000594589.1	type II secretion system minor pseudopilin GspJ	Machinery gene
KAB04_RS10720 (KAB04_02171)	xcpV	2239870..2240250 (-)	381	WP_000836911.1	type II secretion system minor pseudopilin GspI	Machinery gene
KAB04_RS10725 (KAB04_02172)	-	2240240..2240794 (-)	555	WP_000841373.1	type II secretion system protein	-
KAB04_RS10730 (KAB04_02173)	-	2240804..2241412 (-)	609	WP_000375838.1	TetR/AcrR family transcriptional regulator	-
KAB04_RS10735 (KAB04_02174)	-	2241450..2242223 (-)	774	WP_000497298.1	TatD family hydrolase	-
KAB04_RS10740 (KAB04_02175)	-	2242241..2242582 (-)	342	WP_001183024.1	PilZ domain-containing protein	-
KAB04_RS10745 (KAB04_02176)	-	2242594..2243574 (-)	981	WP_001075411.1	DNA polymerase III subunit delta'	-
KAB04_RS10750 (KAB04_02177)	kdsB	2243586..2244347 (-)	762	WP_000680697.1	3-deoxy-manno-octulosonate cytidylyltransferase	-

Sequence

Protein

• Length: 233 a.a.
• Molecular weight: 26639.58 Da
• Isoelectric Point: 9.3468

>NTDB_id=201048 KAB04_RS10715 WP_000594589.1 2239169..2239870(-) (xcpW) [Acinetobacter baumannii strain KAB04]
MIKNKYIHIRSIDSRLAARSSSARLTRASGFTLVELLVAIAIFAVLSLLGWKIFDYLLKVRDRNAEHEVHLFELQDAYQQ
ILRDTLQIIPLSANQGGQLHPALEIDNQILRFSKAGVTDPLKQGLSPFERIEYRYDADQKKLYRLKYTNLNTSNREQPLS
STLLSQVDQYQIMVLTPQEVTKWPEVNIDPTKPNELKKLPKGIKIQLTVAGVNYEWIYSLNQGDLSLSQEGNS

Nucleotide

• Length: 702 bp

>NTDB_id=201048 KAB04_RS10715 WP_000594589.1 2239169..2239870(-) (xcpW) [Acinetobacter baumannii strain KAB04]
ATGATAAAAAATAAATATATTCACATCCGAAGCATTGATTCTCGCCTTGCAGCACGATCGAGCAGTGCTCGATTAACTCG
CGCCTCAGGATTTACTTTGGTTGAATTGTTAGTCGCGATCGCTATCTTTGCGGTTTTATCTTTATTGGGGTGGAAAATTT
TCGATTACTTGCTCAAAGTTCGTGATCGTAATGCCGAACATGAAGTGCATTTATTTGAATTACAAGATGCTTATCAACAA
ATTCTTCGTGATACTTTGCAGATTATCCCTTTATCCGCAAACCAAGGTGGTCAACTTCATCCAGCTTTAGAAATCGATAA
TCAAATTTTACGTTTTAGCAAAGCAGGCGTAACGGATCCTTTAAAACAAGGCTTATCACCATTTGAACGAATTGAATATC
GTTATGATGCAGACCAAAAAAAATTATATCGTCTTAAATATACAAATTTGAATACTTCGAACAGAGAGCAACCTTTATCG
AGTACTTTGTTAAGTCAAGTCGACCAATATCAGATTATGGTTTTGACTCCGCAAGAAGTCACAAAATGGCCCGAGGTTAA
TATTGATCCAACGAAACCTAATGAGTTAAAAAAATTACCGAAAGGGATAAAAATCCAACTTACAGTCGCTGGTGTAAATT
ATGAGTGGATTTATAGCTTAAATCAGGGTGACTTATCGCTTTCGCAGGAAGGTAATTCATAA

Domains

Predicted by InterproScan.

• Prokaryotic N-terminal methylation motif (N_methyl) (27-49)

• Type II secretion system (T2SS), protein J (T2SSJ) (83-212)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
xcpW	Acinetobacter baumannii D1279779	99.571	100	0.996