Detailed information NTG0201041

Bioinformatically predicted

Overview

• Name: rapC
• Type: Regulator
• Locus tag: CG450_RS16855
• Genome accession: NZ_CP022477
• Coordinates: 3189590..3190708 (-)
• Length: 372 a.a.
• NCBI ID: WP_009328956.1
• Uniprot ID: -
• Organism: Bacillus licheniformis strain BL-010
• Function: inhibit the DNA-binding function of ComA (predicted from homology) Competence regulation

Genomic Context

Location: 3184590..3195708

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
CG450_RS16830	-	3185299..3186525 (-)	1227	WP_009328954.1	metallophosphoesterase family protein	-
CG450_RS16835	-	3186645..3187913 (-)	1269	WP_003180232.1	ABC transporter permease	-
CG450_RS16840	-	3187906..3188802 (-)	897	WP_003180230.1	ABC transporter ATP-binding protein	-
CG450_RS16845	-	3188920..3189105 (+)	186	WP_003180228.1	YhzD family protein	-
CG450_RS16850	-	3189180..3189458 (-)	279	WP_003180226.1	hypothetical protein	-
CG450_RS22850	-	3189463..3189600 (-)	138	WP_016886158.1	hypothetical protein	-
CG450_RS16855	rapC	3189590..3190708 (-)	1119	WP_009328956.1	Rap family tetratricopeptide repeat protein	Regulator
CG450_RS16860	-	3190835..3191611 (-)	777	WP_011197707.1	enoyl-CoA hydratase	-
CG450_RS16865	-	3191812..3192141 (+)	330	WP_016886161.1	hypothetical protein	-
CG450_RS16870	-	3192206..3192703 (+)	498	WP_003180220.1	cation:proton antiporter regulatory subunit	-
CG450_RS16875	-	3192710..3193921 (+)	1212	WP_003180218.1	cation:proton antiporter	-
CG450_RS16880	-	3194003..3195508 (-)	1506	WP_025808244.1	coproporphyrinogen III oxidase	-

Sequence

Protein

• Length: 372 a.a.
• Molecular weight: 43356.03 Da
• Isoelectric Point: 5.5287

>NTDB_id=201041 CG450_RS16855 WP_009328956.1 3189590..3190708(-) (rapC) [Bacillus licheniformis strain BL-010]
MKQKIPSEYVARKLNDWYNAIRKNQIAASESLKAEILNDFQDMEENQDVLLYYSLLEFRHKLMLSYLKPKETENIEKNLR
DLEEKEDQMTGLLNYYYWFFKGMYEFKQKRFVKAIGCYKTAEQKVSALEDEVEKAEFYYKLAEIYYYINQRYLSINYATL
ASDIFNRYETLKEKKIFCDFIIAGNWVESMTYGPALKSLANALEDARKIKNSHLTAAAHFNLGNCYFHQESYREASDHME
SALSIFEQESSSYIPKVLYNLMYVRLKQGNHAGAAACYEKGIRSAASLGDEEHAAKLNILCGLYLDGGDQKAVENGFDYL
ESNHLYAAVEELALDAAQYYNQIERLKDSIFYYEKCAQASRKIKRGDALYES

Nucleotide

• Length: 1119 bp

>NTDB_id=201041 CG450_RS16855 WP_009328956.1 3189590..3190708(-) (rapC) [Bacillus licheniformis strain BL-010]
TTGAAACAGAAGATTCCATCTGAATACGTTGCTAGAAAGCTGAATGATTGGTACAACGCCATTCGGAAAAATCAGATCGC
CGCCAGTGAATCATTGAAAGCGGAAATTTTAAATGATTTTCAAGACATGGAAGAAAATCAGGACGTCCTGCTCTACTATT
CGCTGCTTGAATTCAGGCATAAACTGATGCTCAGCTATTTGAAACCGAAAGAGACTGAAAATATTGAAAAAAACCTCCGC
GACTTAGAAGAAAAAGAAGACCAAATGACGGGTTTATTAAACTATTATTACTGGTTTTTTAAAGGGATGTATGAGTTCAA
ACAAAAGCGGTTCGTCAAAGCAATCGGCTGCTATAAAACGGCTGAACAAAAAGTCAGCGCACTGGAAGACGAGGTTGAAA
AAGCGGAATTTTATTATAAGCTTGCGGAAATCTACTATTATATCAACCAGAGATACCTGTCGATCAACTATGCGACGCTA
GCTTCCGACATTTTTAACCGGTATGAAACGCTAAAAGAAAAAAAGATTTTCTGCGATTTTATCATTGCCGGTAATTGGGT
TGAATCGATGACATACGGACCCGCGCTGAAAAGCCTGGCCAATGCGCTTGAAGACGCCAGGAAAATCAAAAACAGCCATT
TGACGGCAGCCGCTCATTTTAATTTGGGAAATTGCTATTTCCACCAAGAATCGTACCGGGAAGCCTCAGATCATATGGAG
AGCGCCCTTTCCATTTTTGAACAGGAAAGTTCATCATATATTCCCAAAGTGCTGTACAACTTGATGTACGTCCGTCTCAA
GCAGGGGAACCATGCCGGAGCTGCCGCCTGTTATGAAAAAGGCATCCGAAGCGCGGCATCGCTCGGGGATGAAGAACACG
CGGCAAAGCTTAACATTCTGTGCGGGCTGTATTTAGACGGAGGGGATCAGAAAGCCGTGGAAAACGGATTTGATTATTTG
GAGTCAAATCATTTATATGCTGCTGTTGAAGAGCTGGCTTTAGATGCAGCCCAGTATTATAATCAAATTGAGCGGCTGAA
AGATTCCATTTTTTACTATGAAAAGTGCGCTCAGGCAAGTCGAAAAATCAAAAGGGGAGATGCGTTGTATGAAAGCTAA

Domains

Predicted by InterProScan.

• Tetratricopeptide repeat (TPR_12) (195-248)

• response regulator aspartate phosphatase H, N terminal (RapH_N) (4-64)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
rapC	Bacillus subtilis subsp. subtilis str. 168	37.166	100	0.374