Detailed information
Bioinformatically predicted
Overview
| Name | pilE | Type | Machinery gene |
| Locus tag | KAB03_RS17370 | Genome accession | NZ_CP017646 |
| Coordinates | 3640349..3640774 (-) | Length | 141 a.a. |
| NCBI ID | WP_000788342.1 | Uniprot ID | N9K1U0 |
| Organism | Acinetobacter baumannii strain KAB03 | ||
| Function | assembly of type IV pilus (predicted from homology) DNA binding and uptake |
||
Genomic Context
Location: 3635349..3645774
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| KAB03_RS17340 (KAB03_03498) | - | 3635877..3636911 (+) | 1035 | WP_001189447.1 | lipase secretion chaperone | - |
| KAB03_RS17345 (KAB03_03499) | - | 3637026..3637967 (+) | 942 | WP_085916958.1 | lipase family alpha/beta hydrolase | - |
| KAB03_RS17350 (KAB03_03500) | rplS | 3638020..3638388 (-) | 369 | WP_000014562.1 | 50S ribosomal protein L19 | - |
| KAB03_RS17355 (KAB03_03501) | trmD | 3638597..3639337 (-) | 741 | WP_000464598.1 | tRNA (guanosine(37)-N1)-methyltransferase TrmD | - |
| KAB03_RS17360 (KAB03_03502) | rimM | 3639383..3639931 (-) | 549 | WP_000189236.1 | ribosome maturation factor RimM | - |
| KAB03_RS17365 (KAB03_03503) | rpsP | 3639951..3640202 (-) | 252 | WP_000260334.1 | 30S ribosomal protein S16 | - |
| KAB03_RS17370 (KAB03_03504) | pilE | 3640349..3640774 (-) | 426 | WP_000788342.1 | type IV pilin protein | Machinery gene |
| KAB03_RS17375 (KAB03_03505) | pilY2 | 3640771..3641253 (-) | 483 | WP_001046420.1 | type IV pilin protein | Machinery gene |
| KAB03_RS17380 (KAB03_03506) | pilY1 | 3641266..3645120 (-) | 3855 | WP_000768970.1 | PilC/PilY family type IV pilus protein | Machinery gene |
Sequence
Protein
Download Length: 141 a.a. Molecular weight: 15214.45 Da Isoelectric Point: 7.8464
>NTDB_id=201014 KAB03_RS17370 WP_000788342.1 3640349..3640774(-) (pilE) [Acinetobacter baumannii strain KAB03]
MKNGFTLIEIMIVVAIIAILAAIATPSYLQYLRKGHRTAVQSEMMNIAQTLESEKVVHNRYPSNATIQSIYGSNVSPIQG
QALYKLAFATLNDSTWVLTATPISTSSQAGDGIICLNDQGQKFWAKGATVCALSASSSWTE
MKNGFTLIEIMIVVAIIAILAAIATPSYLQYLRKGHRTAVQSEMMNIAQTLESEKVVHNRYPSNATIQSIYGSNVSPIQG
QALYKLAFATLNDSTWVLTATPISTSSQAGDGIICLNDQGQKFWAKGATVCALSASSSWTE
Nucleotide
Download Length: 426 bp
>NTDB_id=201014 KAB03_RS17370 WP_000788342.1 3640349..3640774(-) (pilE) [Acinetobacter baumannii strain KAB03]
ATGAAGAATGGTTTTACTTTAATAGAAATCATGATTGTAGTAGCGATAATTGCAATTTTAGCAGCTATAGCGACACCTTC
ATATTTGCAATATTTACGTAAAGGGCATCGTACAGCTGTTCAATCCGAAATGATGAATATTGCCCAAACATTAGAATCAG
AAAAAGTAGTTCACAATCGTTATCCGTCGAATGCGACCATACAGTCGATTTATGGTTCTAATGTGAGTCCTATACAAGGT
CAGGCTCTATATAAGTTAGCTTTTGCAACTCTGAATGATTCAACTTGGGTACTTACTGCAACACCTATTTCTACTAGCTC
ACAAGCAGGTGATGGAATTATTTGTTTAAATGACCAAGGGCAAAAATTTTGGGCAAAAGGTGCCACAGTTTGTGCACTAT
CTGCTTCATCAAGTTGGACAGAGTAA
ATGAAGAATGGTTTTACTTTAATAGAAATCATGATTGTAGTAGCGATAATTGCAATTTTAGCAGCTATAGCGACACCTTC
ATATTTGCAATATTTACGTAAAGGGCATCGTACAGCTGTTCAATCCGAAATGATGAATATTGCCCAAACATTAGAATCAG
AAAAAGTAGTTCACAATCGTTATCCGTCGAATGCGACCATACAGTCGATTTATGGTTCTAATGTGAGTCCTATACAAGGT
CAGGCTCTATATAAGTTAGCTTTTGCAACTCTGAATGATTCAACTTGGGTACTTACTGCAACACCTATTTCTACTAGCTC
ACAAGCAGGTGATGGAATTATTTGTTTAAATGACCAAGGGCAAAAATTTTGGGCAAAAGGTGCCACAGTTTGTGCACTAT
CTGCTTCATCAAGTTGGACAGAGTAA
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| pilE | Acinetobacter baumannii D1279779 |
92.199 |
100 |
0.922 |
| comF | Acinetobacter baylyi ADP1 |
52.143 |
99.291 |
0.518 |