Detailed information NTG0201003

Bioinformatically predicted

Overview

• Name: xcpW
• Type: Machinery gene
• Locus tag: KAB03_RS09025
• Genome accession: NZ_CP017646
• Coordinates: 1873630..1874331 (-)
• Length: 233 a.a.
• NCBI ID: WP_000594589.1
• Uniprot ID: A0A9P3CZ31
• Organism: Acinetobacter baumannii strain KAB03
• Function: pseudopilus assembly (predicted from homology) DNA binding and uptake

Genomic Context

Location: 1868630..1879331

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
KAB03_RS08995 (KAB03_01811)	-	1868936..1869379 (-)	444	WP_001246675.1	SRPBCC family protein	-
KAB03_RS09000 (KAB03_01812)	tadA	1869449..1869952 (-)	504	WP_000033178.1	tRNA adenosine(34) deaminase TadA	-
KAB03_RS09005 (KAB03_01813)	-	1869959..1871083 (-)	1125	WP_001983908.1	enoyl-CoA hydratase/isomerase family protein	-
KAB03_RS09010 (KAB03_01814)	ung	1871080..1871793 (-)	714	WP_001177528.1	uracil-DNA glycosylase	-
KAB03_RS09015 (KAB03_01815)	-	1871844..1872440 (-)	597	WP_000908452.1	6-pyruvoyl trahydropterin synthase family protein	-
KAB03_RS09020 (KAB03_01816)	gspK	1872671..1873630 (-)	960	WP_000301476.1	type II secretion system minor pseudopilin GspK	-
KAB03_RS09025 (KAB03_01817)	xcpW	1873630..1874331 (-)	702	WP_000594589.1	type II secretion system minor pseudopilin GspJ	Machinery gene
KAB03_RS09030 (KAB03_01818)	xcpV	1874331..1874711 (-)	381	WP_000836911.1	type II secretion system minor pseudopilin GspI	Machinery gene
KAB03_RS09035 (KAB03_01819)	-	1874701..1875255 (-)	555	WP_000841373.1	type II secretion system protein	-
KAB03_RS09040 (KAB03_01820)	-	1875265..1875873 (-)	609	WP_000375838.1	TetR/AcrR family transcriptional regulator	-
KAB03_RS09045 (KAB03_01821)	-	1875911..1876684 (-)	774	WP_000497298.1	TatD family hydrolase	-
KAB03_RS09050 (KAB03_01822)	-	1876702..1877043 (-)	342	WP_001183024.1	PilZ domain-containing protein	-
KAB03_RS09055 (KAB03_01823)	-	1877055..1878035 (-)	981	WP_001075411.1	DNA polymerase III subunit delta'	-
KAB03_RS09060 (KAB03_01824)	kdsB	1878047..1878808 (-)	762	WP_000680697.1	3-deoxy-manno-octulosonate cytidylyltransferase	-

Sequence

Protein

• Length: 233 a.a.
• Molecular weight: 26639.58 Da
• Isoelectric Point: 9.3468

>NTDB_id=201003 KAB03_RS09025 WP_000594589.1 1873630..1874331(-) (xcpW) [Acinetobacter baumannii strain KAB03]
MIKNKYIHIRSIDSRLAARSSSARLTRASGFTLVELLVAIAIFAVLSLLGWKIFDYLLKVRDRNAEHEVHLFELQDAYQQ
ILRDTLQIIPLSANQGGQLHPALEIDNQILRFSKAGVTDPLKQGLSPFERIEYRYDADQKKLYRLKYTNLNTSNREQPLS
STLLSQVDQYQIMVLTPQEVTKWPEVNIDPTKPNELKKLPKGIKIQLTVAGVNYEWIYSLNQGDLSLSQEGNS

Nucleotide

• Length: 702 bp

>NTDB_id=201003 KAB03_RS09025 WP_000594589.1 1873630..1874331(-) (xcpW) [Acinetobacter baumannii strain KAB03]
ATGATAAAAAATAAATATATTCACATCCGAAGCATTGATTCTCGCCTTGCAGCACGATCGAGCAGTGCTCGATTAACTCG
CGCCTCAGGATTTACTTTGGTTGAATTGTTAGTCGCGATCGCTATCTTTGCGGTTTTATCTTTATTGGGGTGGAAAATTT
TCGATTACTTGCTCAAAGTTCGTGATCGTAATGCCGAACATGAAGTGCATTTATTTGAATTACAAGATGCTTATCAACAA
ATTCTTCGTGATACTTTGCAGATTATCCCTTTATCCGCAAACCAAGGTGGTCAACTTCATCCAGCTTTAGAAATCGATAA
TCAAATTTTACGTTTTAGCAAAGCAGGCGTAACGGATCCTTTAAAACAAGGCTTATCACCATTTGAACGAATTGAATATC
GTTATGATGCAGACCAAAAAAAATTATATCGTCTTAAATATACAAATTTGAATACTTCGAACAGAGAGCAACCTTTATCG
AGTACTTTGTTAAGTCAAGTCGACCAATATCAGATTATGGTTTTGACTCCGCAAGAAGTCACAAAATGGCCCGAGGTTAA
TATTGATCCAACGAAACCTAATGAGTTAAAAAAATTACCGAAAGGGATAAAAATCCAACTTACAGTCGCTGGTGTAAATT
ATGAGTGGATTTATAGCTTAAATCAGGGTGACTTATCGCTTTCGCAGGAAGGTAATTCATAA

Domains

Predicted by InterproScan.

• Prokaryotic N-terminal methylation motif (N_methyl) (27-49)

• Type II secretion system (T2SS), protein J (T2SSJ) (83-212)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
xcpW	Acinetobacter baumannii D1279779	99.571	100	0.996