Detailed information    

insolico Bioinformatically predicted

Overview

Name   dinR/lexA   Type   Regulator
Locus tag   CG450_RS12210 Genome accession   NZ_CP022477
Coordinates   2314290..2314913 (+) Length   207 a.a.
NCBI ID   WP_003182222.1    Uniprot ID   Q65J42
Organism   Bacillus licheniformis strain BL-010     
Function   repressor of recA; repressor of dinR (predicted from homology)   
Homologous recombination

Genomic Context

Location: 2309290..2319913
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  CG450_RS12175 - 2309554..2309715 (+) 162 WP_229107189.1 aspartyl-phosphate phosphatase Spo0E family protein -
  CG450_RS12180 - 2309796..2310014 (-) 219 WP_003182236.1 YneF family protein -
  CG450_RS12185 sirA 2310099..2310536 (-) 438 WP_003182234.1 sporulation inhibitor of replication protein SirA -
  CG450_RS12190 recP/tkt 2310691..2312694 (-) 2004 WP_009328229.1 transketolase Machinery gene
  CG450_RS12195 - 2312861..2313094 (-) 234 WP_003182231.1 DUF896 domain-containing protein -
  CG450_RS12200 - 2313160..2313807 (-) 648 WP_003182227.1 recombinase family protein -
  CG450_RS12205 yneA 2313826..2314137 (-) 312 WP_003182225.1 cell division suppressor protein YneA -
  CG450_RS12210 dinR/lexA 2314290..2314913 (+) 624 WP_003182222.1 transcriptional repressor LexA Regulator
  CG450_RS12215 nucA/comI 2315109..2315537 (-) 429 WP_003182220.1 NucA/NucB deoxyribonuclease domain-containing protein Machinery gene
  CG450_RS12220 - 2315896..2316735 (-) 840 WP_003182218.1 thymidylate synthase -
  CG450_RS12225 - 2316795..2317556 (-) 762 WP_003182215.1 hypothetical protein -
  CG450_RS12230 - 2317647..2318480 (-) 834 WP_003182213.1 prohibitin family protein -
  CG450_RS22800 - 2318473..2318613 (-) 141 WP_003182211.1 hypothetical protein -
  CG450_RS12235 wrbA 2318934..2319545 (-) 612 WP_003182210.1 NAD(P)H:quinone oxidoreductase -

Sequence

Protein


Download         Length: 207 a.a.        Molecular weight: 23263.85 Da        Isoelectric Point: 5.3807

>NTDB_id=200996 CG450_RS12210 WP_003182222.1 2314290..2314913(+) (dinR/lexA) [Bacillus licheniformis strain BL-010]
MTKLSKRQLDILRFIKEEVKRKGYPPSVREIGEAVGLASSSTVHGHLARLETKGLIRRDPTKPRAIEILDTEEEIHIPKN
QVVNVPVIGKVTAGTPITAVENIEEYFPLPERLAPPDEHVFMLEIMGESMIDAGILDQDYVIVKQQNTANNGDIVVAMTE
DDEATVKRFFKEETHIRLQPENPTMEPIILQNVTILGKVIGVFRTVH

Nucleotide


Download         Length: 624 bp        

>NTDB_id=200996 CG450_RS12210 WP_003182222.1 2314290..2314913(+) (dinR/lexA) [Bacillus licheniformis strain BL-010]
ATGACGAAGCTATCAAAAAGACAACTTGATATTTTGCGTTTCATTAAAGAAGAAGTGAAGCGCAAAGGCTATCCGCCTTC
CGTCAGGGAGATCGGAGAAGCGGTCGGCCTGGCGTCAAGTTCAACGGTACACGGCCACTTGGCAAGGCTTGAAACGAAGG
GATTGATCAGAAGGGATCCGACGAAGCCGAGAGCGATCGAAATTCTCGATACAGAGGAGGAAATTCATATTCCGAAAAAC
CAGGTTGTCAATGTCCCGGTCATCGGAAAGGTGACCGCCGGTACACCGATTACCGCAGTCGAAAACATCGAGGAATACTT
TCCGCTTCCCGAACGCCTGGCGCCGCCGGATGAGCACGTCTTCATGCTGGAGATCATGGGAGAAAGCATGATCGATGCCG
GAATTCTTGATCAAGATTATGTGATTGTCAAGCAGCAGAACACCGCAAACAACGGGGATATCGTCGTTGCGATGACCGAA
GACGACGAAGCGACTGTTAAGCGGTTTTTCAAGGAGGAAACCCATATCCGCCTTCAGCCGGAAAACCCGACGATGGAGCC
GATCATCCTTCAGAATGTGACGATTCTCGGAAAAGTCATCGGCGTTTTCCGCACTGTTCATTAA

Domains

Predicted by InterProScan.

LexA DNA binding domain (LexA_DNA_bind)

(1-65)

Peptidase S24-like (Peptidase_S24)

(86-200)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB Q65J42

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  dinR/lexA Bacillus subtilis subsp. subtilis str. 168

91.304

100

0.913