Detailed information NTG0200959

Bioinformatically predicted

Overview

• Name: xcpW
• Type: Machinery gene
• Locus tag: KAB02_RS08475
• Genome accession: NZ_CP017644
• Coordinates: 1768111..1768812 (+)
• Length: 233 a.a.
• NCBI ID: WP_000594589.1
• Uniprot ID: A0A9P3CZ31
• Organism: Acinetobacter baumannii strain KAB02
• Function: pseudopilus assembly (predicted from homology) DNA binding and uptake

Genomic Context

Location: 1763111..1773812

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
KAB02_RS08440 (KAB02_01697)	kdsB	1763634..1764395 (+)	762	WP_000680697.1	3-deoxy-manno-octulosonate cytidylyltransferase	-
KAB02_RS08445 (KAB02_01698)	-	1764407..1765387 (+)	981	WP_001075411.1	DNA polymerase III subunit delta'	-
KAB02_RS08450 (KAB02_01699)	-	1765399..1765740 (+)	342	WP_001183024.1	PilZ domain-containing protein	-
KAB02_RS08455 (KAB02_01700)	-	1765758..1766531 (+)	774	WP_000497298.1	TatD family hydrolase	-
KAB02_RS08460 (KAB02_01701)	-	1766569..1767177 (+)	609	WP_000375838.1	TetR/AcrR family transcriptional regulator	-
KAB02_RS08465 (KAB02_01702)	-	1767187..1767741 (+)	555	WP_000841373.1	type II secretion system protein	-
KAB02_RS08470 (KAB02_01703)	xcpV	1767731..1768111 (+)	381	WP_000836911.1	type II secretion system minor pseudopilin GspI	Machinery gene
KAB02_RS08475 (KAB02_01704)	xcpW	1768111..1768812 (+)	702	WP_000594589.1	type II secretion system minor pseudopilin GspJ	Machinery gene
KAB02_RS08480 (KAB02_01705)	gspK	1768812..1769771 (+)	960	WP_000301476.1	type II secretion system minor pseudopilin GspK	-
KAB02_RS08485 (KAB02_01706)	-	1770002..1770598 (+)	597	WP_000908452.1	6-pyruvoyl trahydropterin synthase family protein	-
KAB02_RS08490 (KAB02_01707)	ung	1770649..1771362 (+)	714	WP_001177528.1	uracil-DNA glycosylase	-
KAB02_RS08495 (KAB02_01708)	-	1771359..1772483 (+)	1125	WP_001983908.1	enoyl-CoA hydratase/isomerase family protein	-
KAB02_RS08500 (KAB02_01709)	tadA	1772490..1772993 (+)	504	WP_000033178.1	tRNA adenosine(34) deaminase TadA	-
KAB02_RS08505 (KAB02_01710)	-	1773063..1773506 (+)	444	WP_001246675.1	SRPBCC family protein	-

Sequence

Protein

• Length: 233 a.a.
• Molecular weight: 26639.58 Da
• Isoelectric Point: 9.3468

>NTDB_id=200959 KAB02_RS08475 WP_000594589.1 1768111..1768812(+) (xcpW) [Acinetobacter baumannii strain KAB02]
MIKNKYIHIRSIDSRLAARSSSARLTRASGFTLVELLVAIAIFAVLSLLGWKIFDYLLKVRDRNAEHEVHLFELQDAYQQ
ILRDTLQIIPLSANQGGQLHPALEIDNQILRFSKAGVTDPLKQGLSPFERIEYRYDADQKKLYRLKYTNLNTSNREQPLS
STLLSQVDQYQIMVLTPQEVTKWPEVNIDPTKPNELKKLPKGIKIQLTVAGVNYEWIYSLNQGDLSLSQEGNS

Nucleotide

• Length: 702 bp

>NTDB_id=200959 KAB02_RS08475 WP_000594589.1 1768111..1768812(+) (xcpW) [Acinetobacter baumannii strain KAB02]
ATGATAAAAAATAAATATATTCACATCCGAAGCATTGATTCTCGCCTTGCAGCACGATCGAGCAGTGCTCGATTAACTCG
CGCCTCAGGATTTACTTTGGTTGAATTGTTAGTCGCGATCGCTATCTTTGCGGTTTTATCTTTATTGGGGTGGAAAATTT
TCGATTACTTGCTCAAAGTTCGTGATCGTAATGCCGAACATGAAGTGCATTTATTTGAATTACAAGATGCTTATCAACAA
ATTCTTCGTGATACTTTGCAGATTATCCCTTTATCCGCAAACCAAGGTGGTCAACTTCATCCAGCTTTAGAAATCGATAA
TCAAATTTTACGTTTTAGCAAAGCAGGCGTAACGGATCCTTTAAAACAAGGCTTATCACCATTTGAACGAATTGAATATC
GTTATGATGCAGACCAAAAAAAATTATATCGTCTTAAATATACAAATTTGAATACTTCGAACAGAGAGCAACCTTTATCG
AGTACTTTGTTAAGTCAAGTCGACCAATATCAGATTATGGTTTTGACTCCGCAAGAAGTCACAAAATGGCCCGAGGTTAA
TATTGATCCAACGAAACCTAATGAGTTAAAAAAATTACCGAAAGGGATAAAAATCCAACTTACAGTCGCTGGTGTAAATT
ATGAGTGGATTTATAGCTTAAATCAGGGTGACTTATCGCTTTCGCAGGAAGGTAATTCATAA

Domains

Predicted by InterproScan.

• Prokaryotic N-terminal methylation motif (N_methyl) (27-49)

• Type II secretion system (T2SS), protein J (T2SSJ) (83-212)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
xcpW	Acinetobacter baumannii D1279779	99.571	100	0.996