Detailed information    

insolico Bioinformatically predicted

Overview


Name   vraR   Type   Regulator
Locus tag   CG450_RS01485 Genome accession   NZ_CP022477
Coordinates   316600..317238 (-) Length   212 a.a.
NCBI ID   WP_003186252.1    Uniprot ID   Q65DI5
Organism   Bacillus licheniformis strain BL-010     
Function   repress expression of competence genes (predicted from homology)   
Competence regulation

Genomic Context


Location: 311600..322238
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  CG450_RS01470 - 312046..313377 (+) 1332 WP_021837792.1 MFS transporter -
  CG450_RS01475 - 313472..314212 (+) 741 WP_011198419.1 TIGR02206 family membrane protein -
  CG450_RS01480 - 314309..316483 (-) 2175 WP_011198418.1 MMPL family transporter -
  CG450_RS01485 vraR 316600..317238 (-) 639 WP_003186252.1 response regulator Regulator
  CG450_RS01490 - 317231..318454 (-) 1224 WP_011198417.1 sensor histidine kinase -
  CG450_RS22885 - 318725..318895 (+) 171 WP_003186246.1 hypothetical protein -
  CG450_RS01500 - 318892..319068 (+) 177 WP_085959885.1 hypothetical protein -
  CG450_RS01505 - 319190..320053 (+) 864 WP_003186243.1 glycosyltransferase family 8 protein -
  CG450_RS01510 - 320201..321139 (+) 939 WP_230633564.1 phosphoglycerate dehydrogenase -
  CG450_RS01515 - 321170..321550 (-) 381 WP_003186240.1 VOC family protein -

Sequence


Protein


Download         Length: 212 a.a.        Molecular weight: 23718.78 Da        Isoelectric Point: 6.0356

>NTDB_id=200933 CG450_RS01485 WP_003186252.1 316600..317238(-) (vraR) [Bacillus licheniformis strain BL-010]
MNKVLIVDDHLVVREGLKLLIETNDHYIIIGEAENGKAAVRLADELKPDIILMDLYMPEMSGLEAIKLIKEKHDIPIIIL
TTYNEDHLMIEGIELGAKGYLLKDTSSETLFHTMDAAIRGNVLLQPDILKRLQEIQLERMKKQSSDTQLTEKEVIVLKAI
AKGLKSKAIAFDLGVSERTVKSRLTSIYNKLGANSRTEAVTIAMQRGVLTLD

Nucleotide


Download         Length: 639 bp        

>NTDB_id=200933 CG450_RS01485 WP_003186252.1 316600..317238(-) (vraR) [Bacillus licheniformis strain BL-010]
ATGAATAAGGTTTTAATCGTTGATGACCATCTTGTCGTGAGGGAAGGTCTGAAGCTTTTAATTGAAACGAATGATCACTA
CATCATCATAGGAGAGGCGGAAAATGGCAAAGCAGCAGTCCGCCTTGCAGATGAATTAAAACCGGATATTATTCTCATGG
ATTTGTATATGCCGGAGATGAGCGGGTTAGAAGCCATTAAACTAATAAAAGAAAAACACGACATCCCCATCATTATTTTG
ACTACGTATAATGAAGATCACTTAATGATCGAAGGAATTGAATTAGGGGCGAAAGGATATCTATTGAAGGATACAAGTTC
AGAAACCCTTTTTCATACGATGGACGCAGCAATAAGAGGAAACGTGCTATTGCAGCCTGATATCTTAAAACGTCTGCAAG
AAATCCAATTGGAGCGGATGAAGAAGCAGAGCAGTGATACGCAGCTGACAGAAAAGGAAGTCATAGTTCTAAAAGCAATT
GCTAAAGGTCTTAAAAGCAAAGCGATTGCCTTTGATTTGGGCGTCTCTGAGAGAACAGTAAAGTCTAGACTAACGTCCAT
TTACAATAAATTAGGCGCGAATTCAAGAACTGAAGCAGTGACGATTGCCATGCAAAGAGGCGTTCTGACATTAGACTAA


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure
  AlphaFold DB Q65DI5

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  vraR Staphylococcus aureus N315

36.493

99.528

0.363


Multiple sequence alignment