Detailed information    

insolico Bioinformatically predicted

Overview

Name   braR   Type   Regulator
Locus tag   CG450_RS00460 Genome accession   NZ_CP022477
Coordinates   93222..93929 (+) Length   235 a.a.
NCBI ID   WP_009329989.1    Uniprot ID   -
Organism   Bacillus licheniformis strain BL-010     
Function   promote expression of competence genes (predicted from homology)   
Competence regulation

Genomic Context

Location: 88222..98929
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  CG450_RS00445 - 89375..90799 (+) 1425 WP_021837835.1 alanine/glycine:cation symporter family protein -
  CG450_RS00450 - 90954..92639 (+) 1686 WP_009329990.1 methyl-accepting chemotaxis protein -
  CG450_RS00455 - 92668..93039 (-) 372 WP_003177872.1 YxeA family protein -
  CG450_RS00460 braR 93222..93929 (+) 708 WP_009329989.1 response regulator transcription factor Regulator
  CG450_RS00465 - 93926..94933 (+) 1008 WP_003177867.1 sensor histidine kinase -
  CG450_RS00470 - 95025..95789 (+) 765 WP_003177865.1 ABC transporter ATP-binding protein -
  CG450_RS00475 - 95764..97650 (+) 1887 WP_017474424.1 FtsX-like permease family protein -
  CG450_RS00480 - 97798..98886 (+) 1089 WP_003177863.1 acyltransferase family protein -

Sequence

Protein


Download         Length: 235 a.a.        Molecular weight: 27071.02 Da        Isoelectric Point: 4.9777

>NTDB_id=200930 CG450_RS00460 WP_009329989.1 93222..93929(+) (braR) [Bacillus licheniformis strain BL-010]
MQKVMIVEDDPKIADLLKLHIVKYGYNVHVVKDFDRVMDEFRSTAPDLVLLDINLPSFDGYYWCRQIRQESICPVLFISA
RTGEMDQVMALENGGDDFITKPFHAEIVMAKIRSQLRRAYGEYAAKAEERLLEKEGLRLYPERLELTFAGQTAALTKKEA
DIIESLMERHPRISGREDLLAKLWDDQAYVDENTLNVNITRVRKKFQELGIEDAVETVRGAGYRLNVSWVKAGEE

Nucleotide


Download         Length: 708 bp        

>NTDB_id=200930 CG450_RS00460 WP_009329989.1 93222..93929(+) (braR) [Bacillus licheniformis strain BL-010]
ATGCAAAAAGTGATGATTGTAGAAGACGACCCGAAAATTGCAGATTTGTTAAAATTGCATATTGTCAAATACGGATACAA
CGTTCATGTAGTGAAAGACTTTGACCGTGTCATGGATGAGTTCAGAAGCACGGCGCCTGATCTTGTTCTGCTTGATATTA
ACCTGCCGAGCTTTGACGGCTACTACTGGTGCCGGCAAATCCGCCAGGAATCGATTTGCCCCGTCTTGTTTATTTCTGCG
CGGACAGGTGAAATGGATCAGGTGATGGCATTGGAAAACGGCGGAGATGACTTTATCACCAAGCCGTTTCACGCCGAGAT
CGTCATGGCAAAAATACGCAGCCAGCTTCGCAGGGCTTACGGCGAATACGCGGCGAAGGCGGAGGAACGGCTGCTGGAAA
AAGAAGGGCTGCGGCTGTATCCGGAAAGACTTGAACTGACATTTGCCGGTCAAACGGCTGCTTTGACGAAAAAAGAAGCG
GATATTATTGAAAGCTTAATGGAACGCCATCCGAGAATTTCAGGCCGCGAAGATTTGCTGGCCAAGCTGTGGGATGATCA
GGCATATGTGGATGAAAACACGCTTAATGTCAACATTACGCGCGTCAGAAAAAAGTTTCAGGAGCTCGGTATTGAAGATG
CAGTGGAAACAGTGCGGGGCGCGGGCTATCGCTTGAATGTATCCTGGGTGAAGGCGGGAGAGGAATGA

Domains

Predicted by InterProScan.

Response regulator receiver domain (Response_reg)

(4-112)

Transcriptional regulatory protein, C terminal (Trans_reg_C)

(150-225)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  braR Staphylococcus aureus N315

39.462

94.894

0.374

Multiple sequence alignment