Detailed information    

insolico Bioinformatically predicted

Overview

Name   spo0J   Type   Regulator
Locus tag   CG450_RS00065 Genome accession   NZ_CP022477
Coordinates   11884..12732 (+) Length   282 a.a.
NCBI ID   WP_003178034.1    Uniprot ID   Q65CN8
Organism   Bacillus licheniformis strain BL-010     
Function   require for competence development (predicted from homology)   
Competence regulation

Genomic Context

Location: 6884..17732
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  CG450_RS00040 rsmG 7796..8515 (+) 720 WP_061576538.1 16S rRNA (guanine(527)-N(7))-methyltransferase RsmG -
  CG450_RS00045 noc 8613..9464 (+) 852 WP_003178042.1 nucleoid occlusion protein -
  CG450_RS00050 - 9520..10377 (+) 858 WP_003178040.1 RNA polymerase sigma-70 factor -
  CG450_RS00055 - 10444..10887 (+) 444 WP_003178038.1 carboxymuconolactone decarboxylase family protein -
  CG450_RS00060 soj 11130..11891 (+) 762 WP_011201786.1 sporulation initiation inhibitor protein Soj -
  CG450_RS00065 spo0J 11884..12732 (+) 849 WP_003178034.1 ParB/RepB/Spo0J family partition protein Regulator
  CG450_RS00070 yyaC 12769..13386 (-) 618 WP_003178032.1 spore protease YyaC -
  CG450_RS00075 - 13690..14703 (+) 1014 WP_003178030.1 hypothetical protein -
  CG450_RS00080 - 14791..14997 (+) 207 WP_011201785.1 DUF951 domain-containing protein -
  CG450_RS00090 ychF 15176..16276 (+) 1101 WP_003178027.1 redox-regulated ATPase YchF -
  CG450_RS00095 rpsF 16390..16677 (+) 288 WP_003178026.1 30S ribosomal protein S6 -
  CG450_RS00100 ssbA 16724..17236 (+) 513 WP_003178024.1 single-stranded DNA-binding protein SsbA Machinery gene
  CG450_RS00105 rpsR 17288..17527 (+) 240 WP_003178022.1 30S ribosomal protein S18 -

Sequence

Protein


Download         Length: 282 a.a.        Molecular weight: 32283.41 Da        Isoelectric Point: 9.5628

>NTDB_id=200925 CG450_RS00065 WP_003178034.1 11884..12732(+) (spo0J) [Bacillus licheniformis strain BL-010]
MPKGLGKGINALFSNVDLSEETVEEIKLQDLRPNPYQPRKTFDDQSLKDLKESILQHGVLQPIIVRKSIKGYDIVAGERR
FRAAEKAGLETIPAIVRELSESLMMEIALLENLQREDLSPLEEAKAYESLLKHLDMTQEQLAKRLGKSRPHIANHLRLLT
LPEDVQKLIDNGTLSMGHGRTLLGLKNKKKLEPLVQKVVSEQLNVRQLEKLIQQLNADVPRETKKPKQVKDAVIKERESY
LRNYFGTPVTIKKQKKKGRIEIEFYSNEDLERILELLAQEDA

Nucleotide


Download         Length: 849 bp        

>NTDB_id=200925 CG450_RS00065 WP_003178034.1 11884..12732(+) (spo0J) [Bacillus licheniformis strain BL-010]
ATGCCTAAAGGTCTCGGAAAAGGGATTAATGCATTGTTTTCAAATGTTGATTTATCCGAAGAAACGGTTGAGGAAATCAA
GCTGCAAGACTTGCGGCCCAACCCTTATCAGCCAAGAAAAACGTTTGATGACCAATCGTTAAAAGATTTGAAGGAGTCCA
TTTTGCAGCACGGTGTTTTGCAGCCCATCATCGTCAGAAAGTCAATTAAAGGCTATGACATTGTGGCCGGAGAACGCCGT
TTCCGGGCTGCTGAAAAGGCCGGATTGGAAACCATTCCTGCGATTGTGCGCGAGCTGTCGGAATCCCTGATGATGGAGAT
TGCCCTATTGGAAAATCTTCAACGAGAAGACCTGTCTCCGCTTGAAGAAGCAAAAGCCTATGAATCTTTGCTCAAACATC
TCGATATGACCCAGGAACAGCTGGCGAAAAGGCTTGGAAAAAGCAGGCCTCACATCGCCAACCACTTGCGGCTGCTGACA
CTTCCTGAAGACGTTCAAAAGTTAATCGACAACGGCACGTTATCGATGGGCCATGGCCGAACATTGCTTGGATTGAAAAA
CAAGAAAAAGCTTGAGCCGCTTGTTCAAAAGGTCGTGTCCGAACAGTTGAACGTCCGCCAGTTGGAAAAGTTAATTCAAC
AGTTGAACGCTGATGTTCCACGTGAAACAAAGAAGCCGAAACAAGTCAAAGATGCAGTGATCAAGGAACGGGAATCGTAT
TTGCGAAACTATTTTGGAACACCGGTGACCATTAAAAAGCAAAAGAAAAAAGGCAGGATCGAAATCGAATTCTACTCAAA
TGAAGACTTGGAGCGTATTCTCGAATTATTGGCTCAAGAAGACGCATAA

Domains

Predicted by InterProScan.

ParB/Sulfiredoxin domain (ParB_N)

(24-112)

HTH domain found in ParB protein (HTH_ParB)

(163-214)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB Q65CN8

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  spo0J Streptococcus mutans UA159

43.462

92.199

0.401

Multiple sequence alignment