Detailed information NTG0200841

Bioinformatically predicted

Overview

• Name: chiS
• Type: Regulator
• Locus tag: BJD94_RS15495
• Genome accession: NZ_CP017635
• Coordinates: 3078275..3081664 (-)
• Length: 1129 a.a.
• NCBI ID: WP_017421231.1
• Uniprot ID: A0AAW4H994
• Organism: Vibrio vulnificus Env1
• Function: chitin sensor (predicted from homology) Competence regulation

Genomic Context

Location: 3073275..3086664

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
BJD94_RS15480 (BJD94_14185)	-	3073478..3074503 (-)	1026	WP_011079591.1	ABC transporter permease	-
BJD94_RS15485 (BJD94_14190)	-	3074506..3075492 (-)	987	WP_011079592.1	ABC transporter permease	-
BJD94_RS15490 (BJD94_14195)	-	3075661..3077334 (-)	1674	WP_038941398.1	ABC transporter substrate-binding protein	-
BJD94_RS15495 (BJD94_14200)	chiS	3078275..3081664 (-)	3390	WP_017421231.1	response regulator	Regulator
BJD94_RS15500 (BJD94_14205)	rsmC	3081911..3082933 (-)	1023	WP_017421232.1	16S rRNA (guanine(1207)-N(2))-methyltransferase RsmC	-
BJD94_RS15505 (BJD94_14210)	-	3083007..3084092 (-)	1086	WP_013571166.1	AI-2E family transporter	-
BJD94_RS15510 (BJD94_14215)	hemL	3084342..3085637 (-)	1296	WP_038969441.1	glutamate-1-semialdehyde 2,1-aminomutase	-
BJD94_RS15515 (BJD94_14220)	erpA	3085924..3086265 (+)	342	WP_011079598.1	iron-sulfur cluster insertion protein ErpA	-

Sequence

Protein

• Length: 1129 a.a.
• Molecular weight: 127507.47 Da
• Isoelectric Point: 5.8924

>NTDB_id=200841 BJD94_RS15495 WP_017421231.1 3078275..3081664(-) (chiS) [Vibrio vulnificus Env1]
MFKFYRKQKFKRLQSTLMTAFLVLSITPLTITAIFFLQSHSKDLQEQSTSHLLSVRDTKQQQILDYFQAQETEVMGFVRS
ELAYASGGRFYGLVNAFKSLGVDMEQARENAQQRYIQGSGDQIKTSILPESSSYVGSERYRLLHKRYHWAYLELLKRSDF
DDILLVDLDGNVTYSIYKNENFGTNLIEGPFKESMLGKSFRQLANDVSEKRKQNEDYTPVYISDFSVEDGKQVAWLGAPI
IQQGYLHSYAMFRLPNNGITKLIADINKDAAIHTLLVGSDHLPRTMTTKQTDIESSIEVVDKALAGLTDVGTYINSSGEA
TIAAYAPISFKGQTWALVVQLPEKEAFARIHQLEKLFVIAMLIAIVLVFISSHYLSNFITSPLLKLTWAAERVSAGDLDE
NMINTERKDEIGRLAISFERMQRSIRDKIQLIKTQNAELEKNLQLIQKQNDELQLADKLKDEFLATTSHELRTPLHGMIG
IAETLISGANGPLPSNQRYQLDIIIKSGQRLATLVDDLLDYHKMRYGSLDIQKSAVNLASATRLVLELSHHLLGNKTLRI
INQVSNDVAPVSADPQRLEQVLYNLIGNAIKYTTEGKIVISANVVDDKVRVQVVDTGQGIPAEQLEHIFEPLIQAGRDSG
RYRQGAGLGLSISRQLIELMGGSLYVSSQPMVGTTFSFTLPLASADEISATEVMQNQHHFQAPDSNELISLDNSSLPENP
NGPLLIVADDEPVNLRVLESFLRIEGYRVQTASDGPETLELIEHEKPALLLLDIMMPGMSGYQVCHQLRQQYDMAELPII
MLTALSQSEDRVRGFEAGANDYLTKPFNKQELAARIKAHLMASKAEARRLENNRLEAELRQRAMVEASLLETQGRLLEQL
ESAPEAIICIREDKRIRFANDAACKLFKRSLEQLKRSNAEELIAPKYLTVKQQHYCGNIDIYVDDVRQHIETDILKLPEG
SGLDAMFIFNVGGGAAASRVHNLETAVEVLSSYAFDGDKERLQSLKELGGEFTRLADKALGTNKNKQELMREVLVDLMTH
ALDYWESVTGENKFTFAEQSGLWRVYLDRSTLQTRTLDKYMRIETLPKTPRWRTVLSSIEYILEHCKEQSPERTYIEMQR
DKLQRLLTS

Nucleotide

• Length: 3390 bp

>NTDB_id=200841 BJD94_RS15495 WP_017421231.1 3078275..3081664(-) (chiS) [Vibrio vulnificus Env1]
ATGTTTAAGTTTTATCGCAAACAGAAGTTTAAACGCCTTCAAAGCACTCTGATGACTGCGTTTTTGGTGCTAAGTATCAC
GCCATTAACCATCACAGCGATTTTCTTTTTGCAATCACACAGTAAAGATCTCCAAGAGCAAAGCACTTCTCACCTGCTTT
CTGTTCGAGACACCAAGCAGCAACAGATCCTAGATTATTTCCAAGCACAAGAAACGGAAGTGATGGGATTTGTTCGTTCA
GAGTTGGCTTACGCGAGTGGTGGCCGATTTTACGGGCTAGTCAACGCCTTCAAAAGCTTAGGCGTGGATATGGAACAGGC
TAGAGAAAACGCTCAGCAGCGCTATATTCAGGGATCTGGCGATCAAATAAAAACGTCGATTTTGCCGGAATCCAGCTCTT
ATGTCGGTAGTGAACGTTACCGTTTGCTGCATAAGCGCTATCACTGGGCCTATTTGGAGCTTTTGAAGCGATCCGATTTT
GACGATATTTTGTTGGTGGATCTCGATGGCAACGTCACCTACTCCATCTACAAAAATGAAAACTTTGGCACAAACTTAAT
TGAGGGGCCTTTTAAAGAGAGCATGCTCGGCAAAAGCTTCCGTCAATTGGCCAATGACGTCAGCGAAAAACGCAAGCAAA
ACGAAGACTATACCCCCGTCTATATTTCCGACTTCTCGGTTGAAGATGGCAAACAAGTCGCTTGGTTGGGAGCACCGATC
ATCCAGCAAGGCTATCTGCACAGCTACGCCATGTTCAGGCTACCGAACAATGGCATCACTAAACTGATTGCAGACATCAA
TAAAGATGCGGCTATCCACACTTTGCTGGTTGGAAGTGACCACTTACCTCGCACTATGACCACAAAGCAAACCGATATCG
AAAGCAGTATTGAAGTGGTCGATAAGGCGCTCGCGGGACTGACGGATGTCGGGACTTATATCAACAGCAGCGGAGAGGCG
ACCATCGCCGCCTATGCGCCAATTTCATTCAAAGGTCAAACCTGGGCTTTAGTGGTTCAGTTGCCGGAGAAAGAAGCGTT
TGCACGCATTCATCAGTTAGAAAAACTGTTCGTCATCGCCATGTTGATTGCGATCGTGCTGGTGTTTATCTCATCTCACT
ACTTATCGAATTTCATCACCTCACCACTACTCAAACTCACTTGGGCTGCAGAGCGCGTTTCTGCTGGTGATCTCGATGAA
AACATGATTAATACAGAGCGCAAAGACGAAATAGGCCGTTTAGCAATCAGTTTTGAACGAATGCAACGCTCGATTCGCGA
TAAAATTCAGCTCATTAAAACGCAAAATGCGGAGCTAGAGAAAAATCTACAACTGATTCAAAAGCAAAACGACGAATTGC
AATTGGCTGATAAGCTCAAAGATGAATTTTTGGCAACAACCTCTCATGAGCTACGCACTCCACTGCATGGCATGATTGGT
ATTGCAGAAACCCTCATCTCAGGGGCAAACGGCCCACTGCCCTCTAACCAGCGCTATCAACTGGACATCATTATTAAGAG
TGGCCAGCGCTTAGCTACGCTTGTGGATGACTTGCTCGACTACCACAAAATGCGCTATGGCAGTTTGGATATTCAAAAAT
CCGCCGTCAATTTGGCCAGTGCAACTCGACTGGTATTGGAGCTGTCTCACCACTTATTGGGCAACAAAACTCTGCGCATC
ATTAATCAGGTTTCTAACGATGTTGCGCCGGTATCTGCCGATCCACAGCGATTAGAACAGGTGCTGTATAACCTTATTGG
CAATGCGATCAAATACACCACTGAAGGTAAAATCGTCATTTCCGCCAATGTGGTTGACGATAAAGTTCGAGTGCAAGTCG
TCGATACCGGCCAAGGCATTCCCGCAGAACAATTAGAGCATATTTTCGAACCGCTCATTCAAGCTGGTCGAGACTCTGGT
CGTTATCGCCAAGGTGCAGGTCTGGGGCTTTCCATTAGCCGCCAACTGATCGAGTTAATGGGAGGATCGCTCTACGTCAG
CAGTCAACCTATGGTTGGCACCACCTTTAGCTTCACCTTGCCATTGGCCAGCGCAGACGAAATCAGCGCCACGGAAGTCA
TGCAAAATCAACATCACTTCCAAGCACCAGATAGCAATGAATTGATCTCATTAGATAATTCCTCACTGCCAGAGAATCCC
AATGGCCCGCTACTGATTGTGGCCGATGATGAACCCGTCAACTTACGCGTGCTTGAAAGTTTCCTACGCATCGAAGGGTA
CCGAGTGCAAACGGCCTCAGATGGCCCAGAAACACTCGAACTCATTGAACATGAAAAACCCGCCTTGCTGTTGCTCGACA
TCATGATGCCGGGTATGAGCGGTTATCAAGTTTGCCATCAACTCCGACAGCAATACGACATGGCAGAGTTGCCTATTATC
ATGCTAACAGCGTTGAGTCAGAGCGAAGATCGTGTACGAGGATTCGAAGCTGGGGCCAATGATTACTTAACCAAGCCATT
TAATAAGCAAGAGCTTGCGGCCCGAATCAAAGCACATTTAATGGCAAGTAAAGCAGAAGCTCGTCGCTTGGAAAACAATC
GCCTTGAAGCGGAGCTTCGCCAACGTGCAATGGTGGAAGCGAGCTTACTGGAAACACAAGGGCGTTTATTAGAACAATTG
GAGTCGGCCCCAGAAGCCATCATCTGTATTCGTGAAGATAAGCGTATTCGCTTTGCCAATGACGCGGCCTGTAAACTGTT
CAAACGCAGCTTAGAGCAGCTCAAGCGATCAAACGCAGAAGAACTTATTGCTCCCAAATATTTAACCGTCAAACAGCAGC
ATTATTGCGGCAATATCGATATCTATGTCGACGATGTTCGACAGCATATTGAAACGGACATCCTTAAATTACCAGAAGGG
TCTGGCCTTGATGCGATGTTTATCTTTAATGTCGGAGGAGGCGCTGCTGCTTCTCGTGTGCACAACCTAGAAACCGCCGT
GGAAGTCCTTTCAAGCTATGCCTTTGATGGTGACAAAGAGCGCTTACAAAGCCTCAAAGAGCTAGGGGGAGAATTTACTC
GCCTGGCAGACAAAGCGCTGGGTACCAATAAGAATAAGCAAGAGCTGATGCGTGAAGTCCTCGTGGATTTGATGACGCAT
GCACTCGATTATTGGGAGTCAGTGACAGGTGAAAACAAATTTACCTTTGCTGAACAAAGTGGTTTATGGCGCGTTTATCT
CGACCGCAGCACGCTACAAACTCGCACTCTTGATAAATACATGCGAATTGAAACCTTGCCAAAAACGCCGCGTTGGAGAA
CCGTGTTGAGTTCTATTGAGTACATTCTGGAACACTGTAAAGAGCAAAGTCCTGAGCGTACTTACATTGAGATGCAGCGA
GATAAATTACAACGCCTGCTCACCAGCTAA

Domains

Predicted by InterproScan.

• PAS fold (PAS) (877-926)

• Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase (HATPase_c) (574-683)

• Response regulator receiver domain (Response_reg) (726-837)

• HAMP domain (HAMP) (375-427)

• His Kinase A (phospho-acceptor) domain (HisKA) (460-525)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
chiS	Vibrio cholerae strain A1552	77.325	100	0.773