Detailed information NTG0200821

Bioinformatically predicted

Overview

• Name: cytR
• Type: Regulator
• Locus tag: BJD94_RS13970
• Genome accession: NZ_CP017635
• Coordinates: 2758348..2759355 (-)
• Length: 335 a.a.
• NCBI ID: WP_011079334.1
• Uniprot ID: -
• Organism: Vibrio vulnificus Env1
• Function: promote competence gene expression (predicted from homology) Competence regulation

Genomic Context

Location: 2753348..2764355

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
BJD94_RS13940 (BJD94_12660)	zapB	2753486..2753728 (-)	243	WP_017789752.1	cell division protein ZapB	-
BJD94_RS13945 (BJD94_12665)	rraA	2753950..2754462 (-)	513	WP_017419637.1	ribonuclease E activity regulator RraA	-
BJD94_RS13950 (BJD94_12670)	-	2754538..2755455 (-)	918	WP_038964434.1	1,4-dihydroxy-2-naphthoate polyprenyltransferase	-
BJD94_RS13955 (BJD94_12675)	hslU	2755620..2756951 (-)	1332	WP_011079331.1	HslU--HslV peptidase ATPase subunit	-
BJD94_RS13960 (BJD94_12680)	hslV	2756979..2757533 (-)	555	WP_017419639.1	ATP-dependent protease subunit HslV	-
BJD94_RS13965 (BJD94_12685)	-	2757683..2758240 (-)	558	WP_017419640.1	SPOR domain-containing protein	-
BJD94_RS13970 (BJD94_12690)	cytR	2758348..2759355 (-)	1008	WP_011079334.1	DNA-binding transcriptional regulator CytR	Regulator
BJD94_RS13975 (BJD94_12695)	priA	2759584..2761788 (-)	2205	WP_026050203.1	primosomal protein N'	-
BJD94_RS13980 (BJD94_12700)	rpmE	2762069..2762290 (+)	222	WP_011079336.1	50S ribosomal protein L31	-
BJD94_RS13985 (BJD94_12705)	-	2762569..2763846 (+)	1278	WP_103155252.1	malic enzyme-like NAD(P)-binding protein	-
BJD94_RS13990 (BJD94_12710)	metJ	2763933..2764250 (-)	318	WP_011079338.1	met regulon transcriptional regulator MetJ	-

Sequence

Protein

• Length: 335 a.a.
• Molecular weight: 36842.38 Da
• Isoelectric Point: 6.4904

>NTDB_id=200821 BJD94_RS13970 WP_011079334.1 2758348..2759355(-) (cytR) [Vibrio vulnificus Env1]
MATMKDVAQLAGVSTATVSRALMNPDKVSATTRKRVEDAVLEAGYSPNSLARNLRRNESRTIVAIVPDICDPYYTEIIRG
IEDAAIEQGYLVLLGDSGQQKRRESSLVNLVFTKQADGMLLLGTDLPFDVSKPEQKNLPPMVMACEFAPDLELPTVHIDN
LTSAFEAVNYLTQLGHKRIAQISGPKSAALCQFRQQGYQQALRRAGITMNPQYCVESEFSFEGGAKAIRHLLEMNDAPTA
VFCHCDTMAIGAIQEAKKLGFRVPQDLSIVGFDDIQFAQYCDPPLTTISQPRYEIGRQAMLMMLELLKGHDIHSGSRLLE
TKLVVRGSAAPPGLR

Nucleotide

• Length: 1008 bp

>NTDB_id=200821 BJD94_RS13970 WP_011079334.1 2758348..2759355(-) (cytR) [Vibrio vulnificus Env1]
ATGGCGACAATGAAGGATGTTGCCCAGCTTGCAGGAGTTTCAACGGCAACGGTTTCGAGAGCGCTGATGAATCCAGACAA
AGTATCCGCCACAACGCGTAAGCGTGTGGAAGATGCGGTGTTGGAAGCTGGTTATTCCCCAAATTCGCTGGCACGCAATT
TACGCCGCAACGAGTCACGCACTATCGTCGCGATCGTTCCTGACATTTGTGATCCTTACTACACAGAGATCATTCGTGGC
ATTGAAGATGCCGCCATTGAGCAGGGATATTTGGTTCTACTCGGTGACAGCGGCCAACAAAAGCGACGTGAAAGCTCACT
CGTCAATCTCGTTTTTACCAAGCAAGCGGATGGTATGCTACTGCTTGGTACTGACTTACCTTTTGATGTGAGCAAGCCAG
AACAGAAAAATCTTCCTCCGATGGTCATGGCTTGCGAGTTCGCCCCGGACCTCGAACTGCCGACGGTTCATATCGATAAC
TTGACCTCTGCCTTTGAAGCGGTGAACTACCTGACTCAACTGGGCCACAAACGCATCGCCCAAATTTCAGGGCCAAAATC
CGCAGCACTTTGTCAGTTTAGACAACAAGGCTATCAACAAGCTTTGCGCCGTGCCGGCATCACAATGAACCCACAATATT
GTGTTGAGTCTGAGTTCTCTTTTGAAGGTGGGGCGAAAGCGATCCGTCATCTGCTAGAAATGAATGATGCGCCAACCGCT
GTCTTCTGTCATTGTGACACCATGGCTATCGGGGCGATTCAAGAAGCGAAAAAATTGGGCTTCCGAGTACCCCAAGATCT
GTCAATTGTCGGCTTCGATGACATCCAGTTCGCCCAATATTGCGATCCTCCGCTAACCACCATCTCACAACCACGCTATG
AGATTGGTCGTCAAGCGATGCTGATGATGTTAGAGCTGCTGAAAGGGCATGACATTCACAGTGGCTCACGCCTACTTGAA
ACCAAATTGGTGGTTCGTGGTAGCGCAGCACCTCCGGGCTTACGCTAA

Domains

Predicted by InterproScan.

• Periplasmic binding protein-like domain (Peripla_BP_3) (168-328)

• Bacterial regulatory proteins, lacI family (LacI) (3-48)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
cytR	Vibrio parahaemolyticus RIMD 2210633	89.759	99.104	0.89
cytR	Vibrio cholerae C6706	88.253	99.104	0.875