Detailed information    

insolico Bioinformatically predicted

Overview

Name   mutX   Type   Machinery gene
Locus tag   CGZ53_RS05685 Genome accession   NZ_CP022435
Coordinates   1103909..1104391 (-) Length   160 a.a.
NCBI ID   WP_012658603.1    Uniprot ID   B9DUN0
Organism   Streptococcus uberis strain NZ01     
Function   DNA mismatch repair (predicted from homology)   
Homologous recombination

Genomic Context

Location: 1098909..1109391
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  CGZ53_RS05665 (CGZ53_05660) budA 1098944..1099663 (-) 720 WP_100912111.1 acetolactate decarboxylase -
  CGZ53_RS05670 (CGZ53_05665) alsS 1099675..1101351 (-) 1677 WP_100912112.1 acetolactate synthase AlsS -
  CGZ53_RS05675 (CGZ53_05670) - 1101459..1102700 (-) 1242 WP_046390297.1 tetratricopeptide repeat protein -
  CGZ53_RS05680 (CGZ53_05675) - 1102690..1103871 (-) 1182 WP_012658602.1 AI-2E family transporter -
  CGZ53_RS05685 (CGZ53_05680) mutX 1103909..1104391 (-) 483 WP_012658603.1 NUDIX hydrolase Machinery gene
  CGZ53_RS05690 (CGZ53_05685) - 1104474..1105481 (+) 1008 WP_012658604.1 lactonase family protein -
  CGZ53_RS05695 (CGZ53_05690) - 1105542..1105733 (+) 192 WP_012658605.1 hypothetical protein -
  CGZ53_RS05705 (CGZ53_05700) rfbB 1105954..1107000 (-) 1047 WP_012658606.1 dTDP-glucose 4,6-dehydratase -
  CGZ53_RS05710 (CGZ53_05705) - 1107047..1107640 (-) 594 WP_012658607.1 dTDP-4-dehydrorhamnose 3,5-epimerase family protein -
  CGZ53_RS05715 (CGZ53_05710) rfbA 1107640..1108509 (-) 870 WP_046388129.1 glucose-1-phosphate thymidylyltransferase RfbA -

Sequence

Protein


Download         Length: 160 a.a.        Molecular weight: 18941.26 Da        Isoelectric Point: 4.4518

>NTDB_id=200702 CGZ53_RS05685 WP_012658603.1 1103909..1104391(-) (mutX) [Streptococcus uberis strain NZ01]
MTKLATICYIDNGESLLLLHRNKKENDVHEGKWISVGGKLEEGETPEECAIREIYEETHLTVEKMDFRGIITFPEFTPGH
DWYTYVFKITGFSGDLISNEESREGTLEWVPYEQVLEKPTWEGDYEIFKWILEDRPFFSAKFHYNQANELIEKQVTFYQK

Nucleotide


Download         Length: 483 bp        

>NTDB_id=200702 CGZ53_RS05685 WP_012658603.1 1103909..1104391(-) (mutX) [Streptococcus uberis strain NZ01]
ATGACAAAATTAGCAACCATTTGTTACATTGATAACGGAGAGTCCCTTTTATTGTTGCATCGCAATAAAAAAGAGAATGA
CGTCCACGAAGGCAAATGGATCTCAGTAGGTGGTAAATTGGAAGAAGGTGAGACACCTGAGGAATGTGCCATTCGTGAAA
TCTATGAAGAAACACATTTAACCGTTGAAAAAATGGATTTTAGAGGCATTATTACCTTTCCAGAGTTTACGCCAGGACAT
GATTGGTATACCTATGTTTTTAAAATAACAGGTTTTTCAGGTGACTTGATTTCCAACGAAGAATCTCGAGAAGGAACATT
GGAGTGGGTTCCTTATGAACAAGTCTTAGAAAAACCAACTTGGGAAGGGGATTATGAAATCTTTAAATGGATTTTGGAAG
ACCGTCCATTTTTCTCAGCAAAGTTTCACTATAACCAAGCTAACGAATTAATCGAAAAACAGGTTACATTTTATCAAAAA
TAG

Domains

Predicted by InterProScan.

NUDIX domain (NUDIX)

(4-130)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB B9DUN0

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  mutX Streptococcus pneumoniae R6

66.038

99.375

0.656