Detailed information    

insolico Bioinformatically predicted

Overview


Name   pilZ   Type   Machinery gene
Locus tag   BJK09_RS06760 Genome accession   NZ_CP017601
Coordinates   1482945..1483286 (+) Length   113 a.a.
NCBI ID   WP_061486188.1    Uniprot ID   -
Organism   Legionella pneumophila strain D6026     
Function   assembly of type IV pilus (predicted from homology)   
DNA binding and uptake

Genomic Context


Location: 1477945..1488286
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  BJK09_RS06730 (BJK09_06625) fabG 1477950..1478693 (+) 744 WP_416136762.1 3-oxoacyl-ACP reductase FabG -
  BJK09_RS06735 (BJK09_06630) acpP 1478778..1479026 (+) 249 WP_003631752.1 acyl carrier protein -
  BJK09_RS06740 (BJK09_06635) fabF 1479046..1480284 (+) 1239 WP_061486196.1 beta-ketoacyl-ACP synthase II -
  BJK09_RS06745 (BJK09_06640) mltG 1480285..1481283 (+) 999 WP_061486194.1 endolytic transglycosylase MltG -
  BJK09_RS06750 (BJK09_06645) tmk 1481283..1481915 (+) 633 WP_061486192.1 dTMP kinase -
  BJK09_RS06755 (BJK09_06650) - 1481912..1482817 (+) 906 WP_061486190.1 DNA polymerase III subunit delta' -
  BJK09_RS06760 (BJK09_06655) pilZ 1482945..1483286 (+) 342 WP_061486188.1 PilZ domain-containing protein Machinery gene
  BJK09_RS06765 (BJK09_06660) - 1483342..1484130 (+) 789 WP_061486186.1 TatD family hydrolase -
  BJK09_RS06770 (BJK09_06665) - 1484791..1486143 (+) 1353 WP_061486184.1 hypothetical protein -
  BJK09_RS06775 (BJK09_06670) - 1486246..1487346 (+) 1101 WP_061486182.1 anhydro-N-acetylmuramic acid kinase -

Sequence


Protein


Download         Length: 113 a.a.        Molecular weight: 12443.47 Da        Isoelectric Point: 8.2421

>NTDB_id=200633 BJK09_RS06760 WP_061486188.1 1482945..1483286(+) (pilZ) [Legionella pneumophila strain D6026]
MTEKPQLINCSFPNEASLYMAYMPFVKGGGLFIRAQHVYPLGQSLEVSVKLLNENEPYLVVGKVAWITPKGAQGNKPPGV
GIQFTGENSRYLCNKIETYLAGMLKSCQVTDTI

Nucleotide


Download         Length: 342 bp        

>NTDB_id=200633 BJK09_RS06760 WP_061486188.1 1482945..1483286(+) (pilZ) [Legionella pneumophila strain D6026]
ATGACCGAAAAACCACAGCTTATAAACTGCTCATTTCCCAATGAAGCATCTTTATACATGGCTTATATGCCTTTTGTGAA
AGGTGGCGGTCTTTTTATAAGAGCTCAACACGTTTACCCTTTAGGACAGTCACTTGAAGTATCGGTTAAATTACTTAATG
AAAATGAACCTTATTTGGTAGTGGGTAAAGTAGCCTGGATTACTCCGAAAGGTGCGCAAGGTAATAAACCTCCGGGAGTT
GGTATTCAATTTACAGGTGAAAATAGTCGTTACCTATGTAACAAGATAGAAACCTATTTGGCAGGAATGTTAAAATCATG
TCAGGTTACAGATACTATTTAG

Domains


Predicted by InterproScan.

(8-101)


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  pilZ Legionella pneumophila str. Paris

94.69

100

0.947

  pilZ Legionella pneumophila strain ERS1305867

94.69

100

0.947


Multiple sequence alignment