Detailed information
Bioinformatically predicted
Overview
| Name | rocC | Type | Regulator |
| Locus tag | BJK09_RS00700 | Genome accession | NZ_CP017601 |
| Coordinates | 158383..159075 (+) | Length | 230 a.a. |
| NCBI ID | WP_027228093.1 | Uniprot ID | A0A2S6F9K3 |
| Organism | Legionella pneumophila strain D6026 | ||
| Function | rocR chaperone; repress natural transformation (predicted from homology) Competence regulation |
||
Genomic Context
Location: 153383..164075
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| BJK09_RS15670 | - | 154054..154230 (-) | 177 | WP_071974612.1 | dodecin domain-containing protein | - |
| BJK09_RS00685 (BJK09_00685) | - | 154408..156876 (+) | 2469 | WP_027228090.1 | hypothetical protein | - |
| BJK09_RS00690 (BJK09_00690) | dapB | 156974..157705 (-) | 732 | WP_027228091.1 | 4-hydroxy-tetrahydrodipicolinate reductase | - |
| BJK09_RS00695 (BJK09_00695) | - | 157841..158026 (-) | 186 | WP_027228092.1 | hypothetical protein | - |
| BJK09_RS00700 (BJK09_00700) | rocC | 158383..159075 (+) | 693 | WP_027228093.1 | ProQ/FINO family protein | Regulator |
| BJK09_RS00705 (BJK09_00705) | - | 159076..160146 (+) | 1071 | WP_027228094.1 | hypothetical protein | - |
Sequence
Protein
Download Length: 230 a.a. Molecular weight: 25758.66 Da Isoelectric Point: 10.7030
>NTDB_id=200619 BJK09_RS00700 WP_027228093.1 158383..159075(+) (rocC) [Legionella pneumophila strain D6026]
MRKQALHPRTAVINKAQKNQSKRARSDALLWLAANFPEAFDNSLRIRPLKIGIMSDILQHAEKAEQVGISKSKLREAVVL
FTRRLDYLACLKAREVRIDLQGNPVAEVTEEEAEHASMKIKKRVEKSVKNARKQVSGKVVTHSHVNNQQSTISSIKPINS
IDSHPEPVLPVYPLRSSAYTSQNTAMQSAKPSSVVVKHKAPKQYDPDAVARLKEKLGLSRKAEDKKETTE
MRKQALHPRTAVINKAQKNQSKRARSDALLWLAANFPEAFDNSLRIRPLKIGIMSDILQHAEKAEQVGISKSKLREAVVL
FTRRLDYLACLKAREVRIDLQGNPVAEVTEEEAEHASMKIKKRVEKSVKNARKQVSGKVVTHSHVNNQQSTISSIKPINS
IDSHPEPVLPVYPLRSSAYTSQNTAMQSAKPSSVVVKHKAPKQYDPDAVARLKEKLGLSRKAEDKKETTE
Nucleotide
Download Length: 693 bp
>NTDB_id=200619 BJK09_RS00700 WP_027228093.1 158383..159075(+) (rocC) [Legionella pneumophila strain D6026]
ATGAGAAAGCAGGCGCTGCACCCACGAACCGCTGTTATCAATAAAGCACAAAAAAATCAATCCAAACGTGCACGATCAGA
CGCATTATTATGGCTTGCGGCTAATTTTCCTGAGGCATTTGATAATTCTTTGCGTATTCGGCCATTAAAGATTGGTATTA
TGTCTGACATATTGCAGCATGCAGAAAAAGCAGAGCAAGTTGGAATTTCTAAAAGTAAATTAAGAGAAGCGGTCGTTCTT
TTTACCCGTCGTCTTGATTATCTGGCGTGCCTGAAGGCACGTGAAGTCCGTATCGATTTGCAAGGAAATCCAGTGGCGGA
GGTTACGGAAGAAGAAGCTGAGCATGCTTCCATGAAAATTAAAAAACGTGTGGAAAAGAGTGTTAAAAATGCTCGCAAAC
AAGTAAGTGGAAAAGTAGTTACTCATTCGCATGTCAATAATCAACAGAGTACAATTTCCAGCATTAAGCCAATCAATTCG
ATTGACTCTCATCCTGAGCCTGTTTTGCCAGTATATCCCCTCAGAAGTTCTGCGTATACATCACAAAATACGGCCATGCA
ATCCGCCAAGCCATCATCCGTAGTAGTCAAACATAAAGCGCCAAAGCAATATGATCCGGATGCCGTAGCTCGTTTAAAAG
AAAAATTAGGATTGTCTCGAAAAGCAGAAGATAAAAAGGAAACAACAGAGTAA
ATGAGAAAGCAGGCGCTGCACCCACGAACCGCTGTTATCAATAAAGCACAAAAAAATCAATCCAAACGTGCACGATCAGA
CGCATTATTATGGCTTGCGGCTAATTTTCCTGAGGCATTTGATAATTCTTTGCGTATTCGGCCATTAAAGATTGGTATTA
TGTCTGACATATTGCAGCATGCAGAAAAAGCAGAGCAAGTTGGAATTTCTAAAAGTAAATTAAGAGAAGCGGTCGTTCTT
TTTACCCGTCGTCTTGATTATCTGGCGTGCCTGAAGGCACGTGAAGTCCGTATCGATTTGCAAGGAAATCCAGTGGCGGA
GGTTACGGAAGAAGAAGCTGAGCATGCTTCCATGAAAATTAAAAAACGTGTGGAAAAGAGTGTTAAAAATGCTCGCAAAC
AAGTAAGTGGAAAAGTAGTTACTCATTCGCATGTCAATAATCAACAGAGTACAATTTCCAGCATTAAGCCAATCAATTCG
ATTGACTCTCATCCTGAGCCTGTTTTGCCAGTATATCCCCTCAGAAGTTCTGCGTATACATCACAAAATACGGCCATGCA
ATCCGCCAAGCCATCATCCGTAGTAGTCAAACATAAAGCGCCAAAGCAATATGATCCGGATGCCGTAGCTCGTTTAAAAG
AAAAATTAGGATTGTCTCGAAAAGCAGAAGATAAAAAGGAAACAACAGAGTAA
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| rocC | Legionella pneumophila str. Paris |
90.87 |
100 |
0.909 |