Detailed information NTG0200615

Bioinformatically predicted

Overview

• Name: pilB/pilB1
• Type: Machinery gene
• Locus tag: BJP34_RS27985
• Genome accession: NZ_CP017599
• Coordinates: 7620975..7622981 (+)
• Length: 668 a.a.
• NCBI ID: WP_070395170.1
• Uniprot ID: -
• Organism: Moorena producens PAL-8-15-08-1
• Function: type IV pilus biogenesis and function (predicted from homology) DNA binding and uptake

Related MGE

Note: This gene co-localizes with putative mobile genetic elements (MGEs) in the genome predicted by VRprofile2, as detailed below.

Gene-MGE association summary

MGE type	MGE coordinates	Gene coordinates	Relative position	Distance (bp)
IS/Tn	7619322..7620539	7620975..7622981	flank	436

Gene organization within MGE regions

Location: 7619322..7622981

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
BJP34_RS27980 (BJP34_27985)	-	7619322..7620539 (-)	1218	WP_070395169.1	RNA-guided endonuclease InsQ/TnpB family protein	-
BJP34_RS27985 (BJP34_27990)	pilB/pilB1	7620975..7622981 (+)	2007	WP_070395170.1	GspE/PulE family protein	Machinery gene

Sequence

Protein

• Length: 668 a.a.
• Molecular weight: 74687.31 Da
• Isoelectric Point: 5.0352

>NTDB_id=200615 BJP34_RS27985 WP_070395170.1 7620975..7622981(+) (pilB/pilB1) [Moorena producens PAL-8-15-08-1]
MTYSSSQRRALVVRNDFSPFGNKLIQAGYVNVDQMQQAWLETRKSGRPLTEVIEAMTGRQLPPDLIRQYKKQQLFELKVL
FGVESLDPEISDISTQQVGGLIETLIPIDICRRYHLLPISKHETEPPSVLVAMVSPDDLEAQDDLNRILRPQGIKLQRMV
ITKEDYQQIISQYLDDQLARQKQLDQQKSVDVKEDLENLGSFDTLQDAPEEAEADLDSSLNEAGGAPIINLVNKILAKAL
QEGVSDIHIEPQEEQLRVRYRKDGVLRQAFDALPQRIHTAVAARFKIMADLDIAERRLPQDGKIRRMFQGRKVDFRVNTL
PSRYGEKVVLRILDNESTQLGLDKLITDPDTLELVREMAKRPFGLILVTGPTGSGKSTTLYSILAERNDPGVNISTAEDP
IEYSLPGITQVQVIREKGMDFASILRAFLRQDPDVILVGETRDKETAKTAIEAALTGHLVLTTLHTNDAAGAIARLDEMG
VEPFMVSGALLGVLAQRLMRRVCSNCRISYQPSSAELARYGLSASRDGEITVYRANTLTPEQIVEARAQGTLCKTCNGIG
YKGRVGVYEVMRISENLQGLINQGAPTERIKEAAVEEGMITILAYSLNLVQQGYTTFEEVERVTFTDSGLETEMKAKRKS
SLTCTTCSAQLQPEWLDCPYCMTPRFQN

Nucleotide

• Length: 2007 bp

>NTDB_id=200615 BJP34_RS27985 WP_070395170.1 7620975..7622981(+) (pilB/pilB1) [Moorena producens PAL-8-15-08-1]
ATGACTTACTCCTCATCTCAACGACGCGCCCTAGTAGTCCGTAACGATTTTTCTCCCTTTGGTAATAAACTGATTCAGGC
TGGTTACGTTAATGTTGACCAGATGCAGCAAGCTTGGCTGGAAACTCGCAAGTCCGGAAGACCCCTGACGGAAGTCATCG
AAGCAATGACCGGACGTCAGTTACCACCTGATTTGATACGCCAATACAAGAAACAGCAGTTGTTTGAACTGAAAGTTCTG
TTTGGTGTTGAGTCTCTAGATCCGGAAATTAGTGATATTTCTACTCAGCAAGTCGGTGGCTTGATCGAAACCCTGATTCC
CATTGATATTTGCCGTCGCTATCACCTGCTCCCCATATCTAAGCATGAAACTGAGCCACCATCGGTTTTGGTGGCAATGG
TTTCTCCTGATGATCTAGAAGCCCAGGATGATTTGAATCGGATTCTACGACCTCAGGGAATAAAGTTGCAACGGATGGTC
ATCACTAAGGAAGACTATCAGCAAATCATTAGTCAGTATCTTGACGATCAGTTGGCACGGCAAAAGCAACTAGATCAACA
AAAATCCGTAGATGTAAAGGAGGATTTAGAGAATTTAGGCTCATTCGATACTTTACAGGATGCCCCAGAGGAAGCCGAAG
CAGACCTAGATTCGTCTTTGAATGAGGCAGGGGGGGCTCCGATCATCAACCTGGTCAACAAAATCCTGGCTAAGGCTTTA
CAAGAAGGGGTTTCTGACATTCACATCGAACCCCAAGAGGAGCAGTTGCGGGTGCGCTATCGCAAAGATGGGGTACTGCG
TCAAGCCTTTGATGCTTTACCACAGCGAATACATACAGCGGTGGCGGCTCGTTTCAAAATCATGGCAGATCTCGACATTG
CGGAAAGACGCTTACCCCAAGACGGTAAAATTCGACGTATGTTCCAGGGGCGCAAAGTTGACTTTCGGGTCAATACCTTG
CCCAGTCGTTATGGGGAAAAGGTGGTTCTGCGGATCCTAGATAACGAATCCACCCAGTTGGGGTTGGATAAGTTGATCAC
AGACCCAGACACCTTAGAATTAGTCAGGGAAATGGCTAAGCGTCCCTTTGGATTAATTTTGGTGACGGGTCCGACGGGAT
CGGGGAAATCAACCACCTTGTATTCAATTCTGGCTGAACGTAATGACCCTGGGGTTAATATCAGTACTGCAGAAGACCCG
ATTGAGTATTCCTTACCTGGGATTACCCAAGTCCAAGTTATCCGGGAAAAAGGCATGGATTTTGCCTCAATTCTACGAGC
CTTTCTGCGCCAAGACCCGGACGTGATTCTGGTGGGTGAGACCCGAGACAAAGAAACAGCTAAAACCGCGATTGAAGCAG
CTTTGACTGGTCACCTAGTATTGACTACTCTACACACTAATGATGCCGCTGGTGCGATCGCTCGTTTAGATGAAATGGGT
GTTGAACCCTTCATGGTTTCCGGTGCCTTGCTGGGAGTGTTGGCTCAACGATTGATGCGGCGTGTTTGTTCCAATTGCCG
CATTTCTTACCAACCAAGTTCTGCGGAACTAGCCCGCTATGGTCTGTCTGCTTCTAGGGATGGCGAGATTACCGTCTATC
GCGCCAATACCCTAACACCGGAGCAAATCGTTGAAGCTAGGGCACAAGGTACACTGTGTAAAACCTGTAATGGTATTGGT
TACAAAGGACGGGTTGGTGTTTATGAAGTTATGCGCATCTCTGAGAATCTGCAAGGCTTAATCAACCAAGGAGCTCCCAC
GGAGAGGATTAAGGAAGCTGCTGTAGAGGAAGGGATGATCACCATATTAGCCTATAGCTTGAATTTGGTACAGCAAGGTT
ATACCACCTTTGAAGAAGTGGAACGAGTAACCTTTACTGATTCCGGCTTAGAGACAGAAATGAAAGCTAAGCGCAAGAGT
TCTCTAACCTGTACCACTTGCTCAGCTCAATTGCAGCCGGAGTGGCTAGACTGTCCTTACTGTATGACACCGCGTTTCCA
AAATTAA

Domains

Predicted by InterproScan.

• Type II secretion system (T2SS), protein E, N-terminal domain (MshEN) (60-178)

• Type II/IV secretion system protein (T2SSE) (234-501)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
pilB/pilB1	Synechocystis sp. PCC 6803	69.834	99.251	0.693
pilB	Deinococcus radiodurans R1 = ATCC 13939 = DSM 20539	37.969	95.808	0.364