Detailed information    

insolico Bioinformatically predicted

Overview

Name   braR   Type   Regulator
Locus tag   SDD27957_04955 Genome accession   CM001076
Coordinates   961669..962334 (-) Length   221 a.a.
NCBI ID   EFY02640.1    Uniprot ID   -
Organism   Streptococcus dysgalactiae subsp. dysgalactiae ATCC 27957     
Function   promote expression of competence genes (predicted from homology)   
Competence regulation

Genomic Context

Location: 956669..967334
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  SDD27957_04935 - 956994..957992 (-) 999 EFY02636.1 geranylgeranyl pyrophosphate synthase -
  SDD27957_04940 - 958071..959963 (-) 1893 EFY02637.1 NADH dehydrogenase, FAD-containing subunit -
  SDD27957_04945 - 960123..960665 (+) 543 EFY02638.1 hypothetical protein -
  SDD27957_04950 - 960725..961672 (-) 948 EFY02639.1 TCS senso kinase BceS -
  SDD27957_04955 braR 961669..962334 (-) 666 EFY02640.1 response regulator protein Regulator
  SDD27957_04960 - 962378..964333 (-) 1956 EFY02641.1 bacitracin export permease protein BceB -
  SDD27957_04965 - 964335..965087 (-) 753 EFY02642.1 ABC transporter ATP-binding protein -
  SDD27957_04970 - 965124..966089 (-) 966 EFY02643.1 nisin resistance protein Nsr, putative -
  SDD27957_04975 - 966255..966737 (+) 483 EFY02644.1 hypothetical protein -

Sequence

Protein


Download         Length: 221 a.a.        Molecular weight: 25558.35 Da        Isoelectric Point: 6.3357

>NTDB_id=20057 SDD27957_04955 EFY02640.1 961669..962334(-) (braR) [Streptococcus dysgalactiae subsp. dysgalactiae ATCC 27957]
MIKHDKIYIIEDDQAILTLLHNHLSQTYDVKTVSNFRDIKQEVLAYQPDLILMDITLPFFNGFYWTTEIRKQSMVPIIFI
SSSNDETDTIMALHMGGDDFISKPFSLTILDAKIAAFLRRSQQFTSDEISFAQFKLHFDGTLSNGKDSVTLSPTEHKILT
ILITKNHEIVTKEEILERLWENDNFIDHNTLNVNMTRLRKKIATIGFDHIHTIRGVGYLVK

Nucleotide


Download         Length: 666 bp        

>NTDB_id=20057 SDD27957_04955 EFY02640.1 961669..962334(-) (braR) [Streptococcus dysgalactiae subsp. dysgalactiae ATCC 27957]
ATGATAAAACATGATAAAATCTATATTATTGAAGATGATCAAGCTATCTTAACTCTTCTTCATAATCATCTTAGCCAAAC
TTACGATGTTAAGACGGTTAGTAACTTTAGAGATATCAAGCAGGAGGTATTGGCCTACCAGCCAGACCTTATTTTAATGG
ATATTACCCTGCCTTTTTTCAATGGTTTTTATTGGACCACTGAAATCCGAAAACAGTCTATGGTTCCTATCATTTTTATT
TCCAGTAGTAATGATGAGACGGATACTATCATGGCTCTTCATATGGGAGGAGATGATTTTATCTCTAAGCCTTTTTCGCT
AACCATTTTAGACGCAAAAATAGCAGCTTTTTTACGACGTAGTCAGCAATTTACTAGTGATGAGATTAGTTTTGCTCAGT
TTAAACTTCATTTTGACGGTACCTTGTCAAATGGTAAAGATTCCGTCACCTTATCACCAACAGAACATAAAATCCTGACC
ATATTGATAACCAAAAATCATGAAATTGTAACCAAAGAAGAAATCCTGGAAAGACTCTGGGAAAATGATAATTTCATTGA
TCACAATACCCTCAACGTCAATATGACACGTCTGCGAAAGAAAATTGCGACTATCGGCTTTGATCATATTCATACTATAA
GGGGAGTGGGGTATCTTGTTAAATGA

Domains

Predicted by InterProScan.

Transcriptional regulatory protein, C terminal (Trans_reg_C)

(148-219)

Response regulator receiver domain (Response_reg)

(7-114)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  braR Staphylococcus aureus N315

46.818

99.548

0.466

Multiple sequence alignment