Detailed information NTG0020056

Bioinformatically predicted

Overview

• Name: xerS
• Type: Machinery gene
• Locus tag: SDD27957_04910
• Genome accession: CM001076
• Coordinates: 952676..953746 (+)
• Length: 356 a.a.
• NCBI ID: EFY02631.1
• Uniprot ID: -
• Organism: Streptococcus dysgalactiae subsp. dysgalactiae ATCC 27957
• Function: homologous recombination (predicted from homology) Homologous recombination

Genomic Context

Location: 947676..958746

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
SDD27957_04880	-	947703..948386 (+)	684	EFY02625.1	ABC transporter ATP-binding protein	-
SDD27957_04885	-	948465..949157 (+)	693	EFY02626.1	response regulator protein	-
SDD27957_04890	-	949141..950208 (+)	1068	EFY02627.1	sensor histidine kinase	-
SDD27957_04895	-	950339..950761 (+)	423	EFY02628.1	hypothetical protein	-
SDD27957_04900	-	950986..952035 (-)	1050	EFY02629.1	peptidoglycan branched peptide synthesis protein, alanine adding enzyme, putative	-
SDD27957_04905	-	952402..952527 (+)	126	EFY02630.1	hypothetical protein	-
SDD27957_04910	xerS	952676..953746 (+)	1071	EFY02631.1	site-specific tyrosine recombinase XerS	Machinery gene
SDD27957_04915	-	953876..954262 (+)	387	EFY02632.1	hypothetical protein	-
SDD27957_04920	-	954334..955284 (-)	951	EFY02633.1	1,4-dihydroxy-2-naphthoate octaprenyltransferase	-
SDD27957_04925	-	955274..956326 (-)	1053	EFY02634.1	thiamine biosynthesis lipoprotein	-
SDD27957_04930	-	956397..956918 (-)	522	EFY02635.1	major membrane immunogen, membrane-anchored lipoprotein	-
SDD27957_04935	-	956994..957992 (-)	999	EFY02636.1	geranylgeranyl pyrophosphate synthase	-

Sequence

Protein

• Length: 356 a.a.
• Molecular weight: 41361.60 Da
• Isoelectric Point: 9.6221

>NTDB_id=20056 SDD27957_04910 EFY02631.1 952676..953746(+) (xerS) [Streptococcus dysgalactiae subsp. dysgalactiae ATCC 27957]
MRRDLLLEKIETYKAIMPWYVLEYYQSKLAVPYSFTTLYEYLKEYKRFFDWLMDADLTDATVIADIDLATLENLTKKDLE
AFVLYLRERPSLNTYSTKQGLSQTTINRTLSALSSLYKYLTEEVENDQGEPYFYRNVMKKVSTKKKKETLASRAENIKQK
LFLGDETMGFLEYVDKDYELKLSNRAKSSFRKNKERDLAIIALLLASGVRLSEAVNLDLKDVNLNMMVIEVIRKGGKRDS
VNVAGFAKPYLEAYLAIRKNRYKAEKQDLAFFLTEYRGVPNRMDASSIEKMVGKYSQDFKIRVTPHKLRHTLATRLYDAT
KSQVLVSHQLGHASTQVTDLYTHIVNDEQKNALDKL

Nucleotide

• Length: 1071 bp

>NTDB_id=20056 SDD27957_04910 EFY02631.1 952676..953746(+) (xerS) [Streptococcus dysgalactiae subsp. dysgalactiae ATCC 27957]
ATGAGACGTGATTTATTACTCGAAAAAATTGAAACTTATAAAGCTATCATGCCTTGGTATGTGTTAGAATACTATCAGTC
AAAATTGGCTGTCCCATACAGTTTTACAACCCTATATGAGTATTTAAAAGAATACAAACGTTTTTTTGACTGGTTAATGG
ATGCTGACTTAACGGATGCGACTGTCATTGCTGATATCGATTTAGCGACTCTTGAAAACTTGACTAAGAAAGATTTAGAG
GCCTTTGTTCTGTACCTAAGAGAACGCCCTTCTCTTAATACTTATTCCACCAAACAGGGTCTTTCTCAAACAACGATTAA
TCGCACCTTGTCTGCTTTATCAAGTCTTTATAAATATTTGACTGAAGAGGTTGAAAATGATCAGGGAGAGCCTTATTTCT
ATCGGAATGTCATGAAGAAGGTATCCACGAAGAAGAAAAAAGAAACCCTAGCTTCTAGAGCTGAAAACATTAAACAAAAG
CTTTTTTTAGGAGATGAAACCATGGGTTTTCTAGAGTATGTAGATAAGGATTATGAACTCAAATTATCCAATCGTGCCAA
ATCTTCTTTCCGTAAAAATAAAGAGAGAGATCTAGCTATTATTGCCCTACTACTGGCCTCAGGCGTTCGTCTATCAGAAG
CCGTTAATCTTGATTTAAAAGATGTTAATCTTAATATGATGGTTATCGAGGTTATCCGCAAAGGGGGAAAACGAGATTCA
GTGAATGTTGCAGGTTTTGCTAAACCTTATTTAGAAGCTTATCTGGCTATTCGCAAGAATCGTTATAAGGCTGAAAAACA
AGACCTTGCCTTCTTTTTAACGGAATATCGAGGGGTCCCTAATCGCATGGATGCCTCCAGTATTGAAAAAATGGTTGGTA
AATACTCTCAAGATTTTAAAATTCGTGTGACTCCCCATAAGTTACGACACACATTAGCCACACGTCTTTATGATGCGACC
AAGTCCCAGGTTTTGGTCAGTCATCAATTGGGGCATGCATCGACTCAAGTTACCGATTTGTATACACATATTGTTAACGA
TGAACAAAAAAACGCCTTAGACAAATTATAA

Domains

Predicted by InterProScan.

• Phage integrase family (Phage_integrase) (181-344)

• Phage integrase, N-terminal SAM-like domain (Phage_int_SAM_4) (33-122)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
xerS	Streptococcus pneumoniae R6	81.18	100	0.812