Detailed information NTG0200521

Bioinformatically predicted

Overview

• Name: recF
• Type: Machinery gene
• Locus tag: BJG91_RS24445
• Genome accession: NZ_CP017577
• Coordinates: 4202335..4203462 (+)
• Length: 375 a.a.
• NCBI ID: WP_000470745.1
• Uniprot ID: A0A9W5QA17
• Organism: Bacillus thuringiensis strain SCG04-02
• Function: homologous recombination (predicted from homology) Homologous recombination

Genomic Context

Location: 4197335..4208462

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
BJG91_RS24415 (BJG91_23575)	spoIIIJ	4197366..4198142 (-)	777	WP_000727734.1	YidC family membrane integrase SpoIIIJ	-
BJG91_RS24420 (BJG91_23580)	rnpA	4198195..4198542 (-)	348	WP_000726619.1	ribonuclease P protein component	-
BJG91_RS24425 (BJG91_23585)	rpmH	4198619..4198753 (-)	135	WP_000831901.1	50S ribosomal protein L34	-
BJG91_RS24430 (BJG91_23590)	dnaA	4199318..4200658 (+)	1341	WP_000428017.1	chromosomal replication initiator protein DnaA	-
BJG91_RS24435 (BJG91_23595)	dnaN	4200837..4201982 (+)	1146	WP_001212884.1	DNA polymerase III subunit beta	-
BJG91_RS24440 (BJG91_23600)	yaaA	4202110..4202322 (+)	213	WP_000821364.1	S4 domain-containing protein YaaA	-
BJG91_RS24445 (BJG91_23605)	recF	4202335..4203462 (+)	1128	WP_000470745.1	DNA replication/repair protein RecF	Machinery gene
BJG91_RS24450 (BJG91_23610)	gyrB	4203501..4205423 (+)	1923	WP_000435982.1	DNA topoisomerase (ATP-hydrolyzing) subunit B	-
BJG91_RS24455 (BJG91_23615)	gyrA	4205512..4207983 (+)	2472	WP_001282864.1	DNA gyrase subunit A	-

Sequence

Protein

• Length: 375 a.a.
• Molecular weight: 43362.67 Da
• Isoelectric Point: 6.6001

>NTDB_id=200521 BJG91_RS24445 WP_000470745.1 4202335..4203462(+) (recF) [Bacillus thuringiensis strain SCG04-02]
MFISEIQLKNYRNYEKLELSFEDKVNVIIGENAQGKTNLMEAIYVLAMAKSHRTSNDRELIRWDEDFGQIKGKLQKRNSS
LSLELNISKKGKKAKLNQLEQQKLSQYIGVMNVVMFAPEDLNLVKGSPQVRRRFLDMELGQIAPVYLYELSQYQKVLTQR
NHLLKKMQGNSKNEETMLDVFTLQLIEHGAKILQKRFEFLHLLQEWAAPIHRGISRGLEELEIVYKPSVDVSESMDLSKI
KEVYYESFQSVKQREIFRGTTLIGPHRDDLQFFVNSKNVQVFGSQGQQRTTALSLKLAEIELIYSEVKEYPILLLDDVLS
ELDDYRQSHLLNTIQGKVQTFVTTTSVDGIEHETLKEAKTIHVTNGTVDCEIDRE

Nucleotide

• Length: 1128 bp

>NTDB_id=200521 BJG91_RS24445 WP_000470745.1 4202335..4203462(+) (recF) [Bacillus thuringiensis strain SCG04-02]
TTGTTTATTTCAGAAATACAATTAAAAAACTATCGCAATTATGAAAAATTAGAGCTTTCCTTTGAAGATAAGGTAAATGT
AATTATCGGCGAAAATGCGCAAGGGAAAACAAATTTGATGGAAGCTATTTATGTTTTAGCGATGGCGAAATCTCATAGAA
CTTCTAATGATCGCGAACTTATCCGCTGGGATGAAGATTTTGGTCAAATAAAAGGGAAATTACAAAAAAGAAACAGTTCT
TTGTCTTTGGAATTAAATATTTCGAAAAAAGGTAAAAAGGCAAAATTAAATCAACTTGAACAGCAAAAGTTAAGTCAATA
TATTGGCGTGATGAACGTTGTCATGTTTGCCCCAGAAGATTTAAATCTTGTAAAAGGAAGCCCTCAAGTAAGAAGACGCT
TTTTAGATATGGAATTAGGACAAATAGCTCCTGTATATTTGTATGAATTAAGTCAATATCAAAAGGTGCTCACGCAACGA
AATCACTTGTTGAAAAAAATGCAAGGGAATAGTAAGAATGAGGAAACGATGTTGGATGTATTTACACTTCAACTAATTGA
GCATGGTGCGAAAATACTGCAAAAACGTTTTGAATTTTTGCATTTGCTACAGGAATGGGCAGCTCCAATTCATCGAGGTA
TAAGCCGTGGATTAGAAGAGTTAGAAATTGTCTATAAACCAAGTGTAGATGTATCAGAATCAATGGATTTGTCGAAAATA
AAAGAAGTATACTATGAAAGTTTTCAATCTGTGAAACAACGTGAAATTTTCCGTGGTACGACTTTAATTGGTCCTCATCG
TGACGATTTACAATTCTTCGTTAATAGTAAAAATGTTCAAGTCTTTGGTTCGCAAGGACAACAACGAACGACCGCACTAT
CCCTAAAATTAGCTGAAATTGAATTGATTTATTCAGAGGTTAAAGAATATCCAATCCTTTTGTTGGATGATGTTTTATCA
GAATTAGATGATTATCGTCAATCACATCTTTTAAATACAATTCAAGGAAAAGTGCAAACATTTGTTACAACGACGAGTGT
CGACGGAATTGAACACGAAACATTAAAAGAAGCGAAAACAATTCATGTAACGAACGGCACTGTAGATTGTGAAATAGATA
GGGAATAA

Domains

Predicted by InterproScan.

• RecF/RecN/SMC N terminal domain (SMC_N) (2-348)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
recF	Bacillus subtilis subsp. subtilis str. 168	66.576	98.133	0.653