Detailed information    

insolico Bioinformatically predicted

Overview

Name   yaaT   Type   Regulator
Locus tag   SDD27957_02170 Genome accession   CM001076
Coordinates   434810..435610 (+) Length   266 a.a.
NCBI ID   EFY02118.1    Uniprot ID   -
Organism   Streptococcus dysgalactiae subsp. dysgalactiae ATCC 27957     
Function   accelerate the production of Spo0A~P (predicted from homology)   
Competence regulation

Genomic Context

Location: 429810..440610
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  SDD27957_02140 - 430068..431021 (+) 954 EFY02112.1 branched-chain amino acid transport system permease protein -
  SDD27957_02145 - 431022..431786 (+) 765 EFY02113.1 branched-chain amino acid transport ATP-binding protein -
  SDD27957_02150 - 431786..432496 (+) 711 EFY02114.1 ABC-type branched-chain amino acid transport system, ATPase component -
  SDD27957_02155 - 432541..433203 (+) 663 EFY02115.1 hypothetical protein -
  SDD27957_02160 tmk 433290..433925 (+) 636 EFY02116.1 thymidylate kinase -
  SDD27957_02165 - 433941..434813 (+) 873 EFY02117.1 DNA polymerase III subunit delta' -
  SDD27957_02170 yaaT 434810..435610 (+) 801 EFY02118.1 hypothetical protein Regulator
  SDD27957_02175 - 435603..435926 (+) 324 EFY02119.1 DNA replication initiation control protein YabA -
  SDD27957_02180 - 435931..436794 (+) 864 EFY02120.1 tetrapyrrole (corrin/porphyrin) methylase family protein -
  SDD27957_02185 - 436821..437213 (+) 393 EFY02121.1 hypothetical protein -
  SDD27957_02190 - 437260..437889 (-) 630 EFY02122.1 copper homeostasis protein -
  SDD27957_02195 - 438006..439097 (+) 1092 EFY02123.1 phosphoserine aminotransferase -
  SDD27957_02200 - 439123..439674 (+) 552 EFY02124.1 acetyltransferase (GNAT) family protein -
  SDD27957_02205 - 439743..440240 (+) 498 EFY02125.1 methylated-DNA--protein-cysteine methyltransferase -
  SDD27957_02210 - 440237..440593 (+) 357 EFY02126.1 arsenate reductase family protein -

Sequence

Protein


Download         Length: 266 a.a.        Molecular weight: 29416.02 Da        Isoelectric Point: 7.5419

>NTDB_id=20035 SDD27957_02170 EFY02118.1 434810..435610(+) (yaaT) [Streptococcus dysgalactiae subsp. dysgalactiae ATCC 27957]
MISAIGIRYGETELVKYAQTDQEFPKGTLLVVKDDKGSHLAKVCQVNKAFSESSLPKGLPTVVRLATAMDKKAFEDNAKF
AAASKAEVVTLIAKNGLDMKLIDIVFPLDRHYVLITFSAEERVDFRQLLKDLAAYFKTRIELHQINSREEAKIYGGLGPC
GRPLCCSSFLGEFPAVSIKMLKNQGLSLNSGKSTGYCGRLLCCLQYEESFYQESKKKFPDYGTIVETSDGPATVAAIDIF
TDTVKVRLKDQLTLVTYALEEVKVGE

Nucleotide


Download         Length: 801 bp        

>NTDB_id=20035 SDD27957_02170 EFY02118.1 434810..435610(+) (yaaT) [Streptococcus dysgalactiae subsp. dysgalactiae ATCC 27957]
ATGATAAGTGCAATTGGAATTCGTTATGGGGAAACGGAGCTTGTCAAATACGCTCAGACAGATCAGGAGTTTCCTAAAGG
GACCTTGTTAGTGGTCAAAGATGATAAGGGAAGCCATCTGGCAAAGGTCTGCCAAGTGAACAAGGCCTTTTCTGAGAGTA
GTCTCCCAAAGGGATTGCCAACCGTTGTAAGACTTGCTACGGCAATGGATAAAAAGGCTTTTGAGGATAATGCCAAGTTT
GCAGCAGCATCAAAGGCAGAAGTAGTGACTTTGATTGCCAAAAATGGGCTAGACATGAAACTTATCGATATTGTCTTTCC
TTTAGATCGGCATTATGTCCTAATTACCTTTTCAGCAGAAGAGCGCGTGGATTTTCGGCAACTGTTAAAAGATTTAGCGG
CTTATTTTAAGACTAGAATCGAACTGCACCAGATTAACAGTCGAGAAGAAGCCAAGATTTATGGGGGCTTAGGACCTTGT
GGACGTCCTCTATGCTGCTCGAGCTTTTTAGGGGAATTTCCAGCTGTCTCTATCAAGATGTTGAAAAATCAAGGTTTGTC
TTTGAATTCTGGGAAGTCAACGGGCTACTGTGGACGTTTGCTCTGTTGTCTCCAGTATGAAGAAAGCTTTTATCAGGAAA
GCAAGAAAAAATTCCCTGATTATGGTACCATAGTAGAGACAAGTGATGGTCCTGCGACGGTAGCGGCTATTGATATTTTT
ACAGATACCGTTAAGGTACGGTTGAAAGACCAGTTGACTTTGGTCACTTATGCTTTAGAGGAGGTTAAAGTAGGTGAATA
A

Domains

Predicted by InterProScan.

PSP1 C-terminal conserved region (PSP1)

(61-145)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  yaaT Bacillus subtilis subsp. subtilis str. 168

41.065

98.872

0.406

Multiple sequence alignment