Detailed information    

insolico Bioinformatically predicted

Overview

Name   braR   Type   Regulator
Locus tag   CFN13_RS03160 Genome accession   NZ_CP022291
Coordinates   653506..654180 (+) Length   224 a.a.
NCBI ID   WP_100185072.1    Uniprot ID   -
Organism   Staphylococcus aureus strain EDCC5464     
Function   promote expression of competence genes (predicted from homology)   
Competence regulation

Genomic Context

Location: 648506..659180
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  CFN13_RS03130 (CFN13_03125) - 648721..649788 (+) 1068 WP_000980142.1 membrane protein -
  CFN13_RS03135 (CFN13_03130) - 649939..650982 (+) 1044 WP_001078080.1 alpha/beta hydrolase -
  CFN13_RS03145 (CFN13_03140) - 651311..651739 (+) 429 WP_000198504.1 hypothetical protein -
  CFN13_RS03150 (CFN13_03145) - 651948..652454 (-) 507 WP_000940129.1 GNAT family N-acetyltransferase -
  CFN13_RS03155 (CFN13_03150) graX 652567..653490 (+) 924 WP_000802952.1 auxiliary protein GraX/ApsX -
  CFN13_RS03160 (CFN13_03155) braR 653506..654180 (+) 675 WP_100185072.1 response regulator transcription factor GraR/ApsR Regulator
  CFN13_RS03165 (CFN13_03160) graS 654173..655213 (+) 1041 WP_001061259.1 histidine kinase GraS/ApsS -
  CFN13_RS03170 (CFN13_03165) vraF 655360..656121 (+) 762 WP_000153733.1 ABC transporter ATP-binding protein VraF -
  CFN13_RS03175 (CFN13_03170) - 656111..658000 (+) 1890 WP_000009398.1 FtsX-like permease family protein -

Sequence

Protein


Download         Length: 224 a.a.        Molecular weight: 26150.98 Da        Isoelectric Point: 4.3614

>NTDB_id=200277 CFN13_RS03160 WP_100185072.1 653506..654180(+) (braR) [Staphylococcus aureus strain EDCC5464]
MQILLVEDDNTLFQELKKELEQWDFNVAGIEDFGKVMDTFESFNPEIVILDVQLPKYDGFYWCRKMREVSNVPILFLSSR
DNPMDQVMSMELGADDYMQKPFYTNVLIAKLQAIYRRVYEFTAEEKRTLTWQDAVVDLSKDSIQKGDQTIFLSKTEMIIL
EILITKKNQIVSRDTIITALWDDEAFVSDNTLTVNVNRLRKKLSEISMDSAIETKVEKGYMAHE

Nucleotide


Download         Length: 675 bp        

>NTDB_id=200277 CFN13_RS03160 WP_100185072.1 653506..654180(+) (braR) [Staphylococcus aureus strain EDCC5464]
ATGCAAATACTACTAGTAGAAGATGACAATACTTTGTTTCAAGAATTGAAAAAAGAATTAGAACAATGGGATTTTAATGT
TGCTGGTATTGAAGATTTCGGCAAAGTAATGGATACATTTGAAAGTTTTAATCCTGAAATTGTTATATTGGATGTTCAAT
TACCTAAATATGATGGGTTTTATTGGTGCAGAAAAATGAGAGAAGTTTCCAATGTGCCAATATTATTCTTATCATCTCGT
GACAACCCGATGGATCAAGTGATGAGTATGGAACTTGGCGCAGATGATTATATGCAAAAGCCTTTTTATACAAATGTATT
AATTGCTAAATTACAAGCGATTTATCGTCGTGTCTATGAGTTTACAGCTGAAGAAAAACGTACATTGACTTGGCAAGATG
CTGTCGTTGATCTATCAAAAGACAGTATACAAAAAGGTGATCAGACGATTTTCCTGTCTAAAACAGAAATGATTATTTTA
GAAATTCTTATTACCAAAAAAAATCAAATCGTTTCGAGAGATACAATTATCACTGCATTATGGGATGATGAAGCATTTGT
TAGTGATAATACGTTAACAGTAAATGTGAATCGTTTACGAAAAAAATTATCTGAAATTAGTATGGATAGTGCAATCGAAA
CAAAAGTAGAAAAAGGATATATGGCTCATGAATAA

Domains

Predicted by InterProScan.

Transcriptional regulatory protein, C terminal (Trans_reg_C)

(148-221)

Response regulator receiver domain (Response_reg)

(3-111)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  braR Staphylococcus aureus N315

40.909

98.214

0.402