Detailed information
Bioinformatically predicted
Overview
| Name | comEA/comE1 | Type | Machinery gene |
| Locus tag | BG588_RS12190 | Genome accession | NZ_CP017541 |
| Coordinates | 2348968..2349306 (+) | Length | 112 a.a. |
| NCBI ID | WP_006251644.1 | Uniprot ID | A0A248ZWT2 |
| Organism | Mannheimia haemolytica strain 1450 | ||
| Function | dsDNA binding (predicted from homology) DNA binding and uptake |
||
Genomic Context
Location: 2343968..2354306
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| BG588_RS12165 (BG588_11935) | rpsL | 2344207..2344581 (-) | 375 | WP_005543325.1 | 30S ribosomal protein S12 | - |
| BG588_RS12170 (BG588_11940) | rfaC | 2344702..2345661 (-) | 960 | WP_006250332.1 | lipopolysaccharide heptosyltransferase RfaC | - |
| BG588_RS12175 (BG588_11945) | waaF | 2345728..2346765 (-) | 1038 | WP_006250331.1 | lipopolysaccharide heptosyltransferase II | - |
| BG588_RS12180 (BG588_11950) | - | 2346876..2347292 (-) | 417 | WP_006250330.1 | MliC family protein | - |
| BG588_RS12185 (BG588_11955) | - | 2347356..2348675 (-) | 1320 | WP_006253337.1 | LysM-like peptidoglycan-binding domain-containing protein | - |
| BG588_RS12190 (BG588_11960) | comEA/comE1 | 2348968..2349306 (+) | 339 | WP_006251644.1 | ComEA family DNA-binding protein | Machinery gene |
| BG588_RS12195 (BG588_11965) | asd | 2349471..2350364 (+) | 894 | WP_006250004.1 | archaetidylserine decarboxylase | - |
| BG588_RS12200 (BG588_11970) | hsdR | 2350436..2352787 (+) | 2352 | WP_006250003.1 | EcoAI/FtnUII family type I restriction enzme subunit R | - |
| BG588_RS12205 (BG588_11975) | - | 2352835..2354304 (+) | 1470 | WP_006250002.1 | HsdM family class I SAM-dependent methyltransferase | - |
Sequence
Protein
Download Length: 112 a.a. Molecular weight: 12111.91 Da Isoelectric Point: 10.0993
>NTDB_id=200054 BG588_RS12190 WP_006251644.1 2348968..2349306(+) (comEA/comE1) [Mannheimia haemolytica strain 1450]
MKKIKQLGLTFLFGLNAMAFAQTPPTTMPVEQNAVTQPVQQTQITNANAVNINTASAAELQDKLVGIGQKKAQAIVDYRT
KNGNFKNIEQLAEVSGIGQATVEKNRANIILE
MKKIKQLGLTFLFGLNAMAFAQTPPTTMPVEQNAVTQPVQQTQITNANAVNINTASAAELQDKLVGIGQKKAQAIVDYRT
KNGNFKNIEQLAEVSGIGQATVEKNRANIILE
Nucleotide
Download Length: 339 bp
>NTDB_id=200054 BG588_RS12190 WP_006251644.1 2348968..2349306(+) (comEA/comE1) [Mannheimia haemolytica strain 1450]
ATGAAGAAAATCAAACAACTTGGTCTAACATTCTTGTTTGGCTTAAATGCAATGGCTTTTGCCCAAACACCGCCAACTAC
AATGCCTGTTGAACAAAATGCAGTCACTCAACCCGTACAGCAAACACAAATCACCAACGCTAATGCGGTAAATATCAATA
CTGCTAGTGCTGCTGAATTGCAAGACAAGCTAGTGGGAATTGGGCAGAAAAAAGCTCAAGCGATTGTCGATTACCGTACT
AAAAACGGCAATTTTAAAAACATTGAGCAACTTGCTGAAGTCTCCGGAATTGGGCAAGCAACGGTAGAAAAAAATCGAGC
CAATATTATTTTAGAATAA
ATGAAGAAAATCAAACAACTTGGTCTAACATTCTTGTTTGGCTTAAATGCAATGGCTTTTGCCCAAACACCGCCAACTAC
AATGCCTGTTGAACAAAATGCAGTCACTCAACCCGTACAGCAAACACAAATCACCAACGCTAATGCGGTAAATATCAATA
CTGCTAGTGCTGCTGAATTGCAAGACAAGCTAGTGGGAATTGGGCAGAAAAAAGCTCAAGCGATTGTCGATTACCGTACT
AAAAACGGCAATTTTAAAAACATTGAGCAACTTGCTGAAGTCTCCGGAATTGGGCAAGCAACGGTAGAAAAAAATCGAGC
CAATATTATTTTAGAATAA
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| comEA/comE1 | Glaesserella parasuis strain SC1401 |
59.292 |
100 |
0.598 |
| comE1/comEA | Haemophilus influenzae Rd KW20 |
52.747 |
81.25 |
0.429 |
| comEA | Vibrio cholerae C6706 |
54.651 |
76.786 |
0.42 |
| comEA | Vibrio cholerae strain A1552 |
54.651 |
76.786 |
0.42 |